RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	SEM1	Q6ZVN7	128 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	GPR149	Q86SP6	731 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	PQLC1	Q8N2U9	271 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	SH2D3C	Q8N5H7	860 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	REPS2	Q8NFH8	660 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	ACE2	Q9BYF1	805 aa	Predicted RBP	4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	KRTAP4-4	Q9BYR3	166 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	TMX1	Q9H3N1	280 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	LANCL2	Q9NS86	450 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	TBCCD1	Q9NVR7	557 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	ZBTB21	Q9ULJ3	1066 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	MAP3K2	Q9Y2U5	619 aa		4.74	□□□□□ -1.65
UBR1-209	ENST00000569243	ERN1	O75460	977 aa	Known RBP	4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	CPE	P16870	476 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	CANX	P27824	592 aa	Known RBP	4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	ID4	P47928	161 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	PER3	P56645	1201 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	CXADR	P78310	365 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	PPP3CA	Q08209	521 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	STRN3	Q13033	797 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243		Q6ZNX1	250 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	MED15	Q96RN5	788 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	UHRF1	Q96T88	793 aa	Predicted RBP	4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	SLK	Q9H2G2	1235 aa	Predicted RBP	4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	TMEM140	Q9NV12	185 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	EDAR	Q9UNE0	448 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	KAT6A	Q92794	2004 aa		4.73	□□□□□ -1.65
UBR1-209	ENST00000569243	FAM171A2	A8MVW0	826 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	PROP1	O75360	226 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	CKB	P12277	381 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	ALAS1	P13196	640 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	HSD3B2	P26439	372 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	FOXR2	Q6PJQ5	311 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	LNX2	Q8N448	690 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	AFAP1L2	Q8N4X5	818 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.72	□□□□□ -1.65
UBR1-209	ENST00000569243		Q96MF0	132 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	ADI1	Q9BV57	179 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	ADGRE3	Q9BY15	652 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	DMTF1	Q9Y222	760 aa		4.72	□□□□□ -1.65
UBR1-209	ENST00000569243	C1QL1	O75973	258 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	GPANK1	O95872	356 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	FGFR4	P22455	802 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	MTNR1B	P49286	362 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	CACNA2D1	P54289	1103 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	SIM1	P81133	766 aa	Predicted RBP	4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	CYP2A13	Q16696	494 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	COLGALT2	Q8IYK4	626 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	NUP133	Q8WUM0	1156 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	CHAC2	Q8WUX2	184 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	SSH1	Q8WYL5	1049 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	PDLIM2	Q96JY6	352 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	PHACTR3	Q96KR7	559 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	SEMA4G	Q9NTN9	838 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	SALL3	Q9BXA9	1300 aa		4.71	□□□□□ -1.66
UBR1-209	ENST00000569243	TLDC2	A0PJX2	215 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243		K7ESF4	209 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	WNT10B	O00744	389 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	EYA4	O95677	639 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	RAP2A	P10114	183 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	WAS	P42768	502 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	GPR3	P46089	330 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	VAV2	P52735	878 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	RAP2B	P61225	183 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	DACT2	Q5SW24	774 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	STRA8	Q7Z7C7	330 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	SLC44A3	Q8N4M1	653 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	QRSL1	Q9H0R6	528 aa	Known RBP	4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	MANSC1	Q9H8J5	431 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	KMT5A	Q9NQR1	393 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	FOXJ2	Q9P0K8	574 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	SLC17A6	Q9P2U8	582 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	SLC23A1	Q9UHI7	598 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	SIK3	Q9Y2K2	1263 aa		4.7	□□□□□ -1.66
UBR1-209	ENST00000569243	GSPT1	P15170	499 aa	Known RBP	4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	ALDH1A3	P47895	512 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	SCAND1	P57086	179 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	STAT4	Q14765	748 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	ATP2B3	Q16720	1220 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	ZNF529	Q6P280	563 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	FITM2	Q8N6M3	262 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	TGFBRAP1	Q8WUH2	860 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	NACC2	Q96BF6	587 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	RNF31	Q96EP0	1072 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	AHCYL2	Q96HN2	611 aa	Known RBP	4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	PNKP	Q96T60	521 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	AIFM2	Q9BRQ8	373 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	UNKL	Q9H9P5	680 aa	Known RBP	4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	CASS4	Q9NQ75	786 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	LRIT1	Q9P2V4	623 aa		4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.69	□□□□□ -1.66
UBR1-209	ENST00000569243	CCDC151	A5D8V7	595 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	GPR32	O75388	356 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	VIL1	P09327	827 aa	Known RBP	4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	SLC6A9	P48067	706 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	MASP1	P48740	699 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	HSD11B2	P80365	405 aa		4.68	□□□□□ -1.66
UBR1-209	ENST00000569243	MRPS35	P82673	323 aa	Known RBP	4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms