RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ZBTB6Q15916 424 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 ENOX2Q16206 610 aaKnown RBP8.54□□□□□ -1.04
CDH3-209ENST00000569080 E2F4Q16254 413 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 ZC2HC1CQ53FD0 456 aaPredicted RBP8.54□□□□□ -1.04
CDH3-209ENST00000569080 SLC8B1Q6J4K2 584 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 SFR1Q86XK3 245 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 CEP57Q86XR8 500 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 MYCT1Q8N699 235 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 KRI1Q8N9T8 703 aaKnown RBP8.54□□□□□ -1.04
CDH3-209ENST00000569080 SMG7Q92540 1137 aaKnown RBP8.54□□□□□ -1.04
CDH3-209ENST00000569080 TCHPQ9BT92 498 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 FGFBP2Q9BYJ0 223 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 PRKD2Q9BZL6 878 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 IKZF4Q9H2S9 585 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 SORCS3Q9UPU3 1222 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 BACE2Q9Y5Z0 518 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 STYXL1Q9Y6J8 313 aa8.54□□□□□ -1.04
CDH3-209ENST00000569080 PPEF2O14830 753 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 SYN3O14994 580 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 OGTO15294 1046 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 PDGFBP01127 241 aaPredicted RBP8.53□□□□□ -1.04
CDH3-209ENST00000569080 C8AP07357 584 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 CLTAP09496 248 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 HOXA9P31269 272 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 RPL9P32969 192 aaKnown RBP8.53□□□□□ -1.04
CDH3-209ENST00000569080 LIG4P49917 911 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 CASP5P51878 434 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 SPAG1Q07617 926 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 KCNA1Q09470 495 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 MRPL58Q14197 206 aaKnown RBP8.53□□□□□ -1.04
CDH3-209ENST00000569080 VARS2Q5ST30 1063 aaKnown RBP8.53□□□□□ -1.04
CDH3-209ENST00000569080 PDXDC1Q6P996 788 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 ANKS3Q6ZW76 656 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 OTOP3Q7RTS5 596 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 ZNF720Q7Z2F6 126 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 RASSF8Q8NHQ8 419 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 DDX12PQ92771 950 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 BICD1Q96G01 975 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 SUSD3Q96L08 255 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 MYADMQ96S97 322 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 PLEKHA5Q9HAU0 1116 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 OLFML3Q9NRN5 406 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 EPS15L1Q9UBC2 864 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 DPP7Q9UHL4 492 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 CPSF3Q9UKF6 684 aaKnown RBP8.53□□□□□ -1.04
CDH3-209ENST00000569080 CDY1Q9Y6F8 540 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 PIEZO1Q92508 2521 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 CACNA1HO95180 2353 aa8.53□□□□□ -1.04
CDH3-209ENST00000569080 WDR27A2RRH5 827 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 SPDYE4A6NLX3 237 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 LACTBL1A8MY62 500 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 ANKRD63C9JTQ0 380 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 TRAPPC3O43617 180 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 PPP6R2O75170 966 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 YEATS4O95619 227 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 KRT18P05783 430 aaKnown RBP8.52□□□□□ -1.05
CDH3-209ENST00000569080 NFICP08651 508 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 HNRNPA1P09651 372 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDH3-209ENST00000569080 ADSSP30520 456 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 OR1D2P34982 312 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 TXLNAP40222 546 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 GUCY2FP51841 1108 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 VCPP55072 806 aaKnown RBP8.52□□□□□ -1.05
CDH3-209ENST00000569080 WNT7BP56706 349 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 NTHL1P78549 312 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 ROR1Q01973 937 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 AXDND1Q5T1B0 1012 aaPredicted RBP8.52□□□□□ -1.05
CDH3-209ENST00000569080 LIN9Q5TKA1 542 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 RRAGBQ5VZM2 374 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 ELMSAN1Q6PJG2 1045 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 SHC4Q6S5L8 630 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 CRELD2Q6UXH1 353 aaPredicted RBP8.52□□□□□ -1.05
CDH3-209ENST00000569080 DYMQ7RTS9 669 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 HSCBQ8IWL3 235 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 UBALD2Q8IYN6 164 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 FBXL6Q8N531 539 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 SLC7A14Q8TBB6 771 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 HVCN1Q96D96 273 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 ZHX3Q9H4I2 956 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 KCNK12Q9HB15 430 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 SEL1LQ9UBV2 794 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 CCDC39Q9UFE4 941 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 LIMD1Q9UGP4 676 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 DUSP12Q9UNI6 340 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 GTF3C3Q9Y5Q9 886 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 SCN1AP35498 2009 aa8.52□□□□□ -1.05
CDH3-209ENST00000569080 COL4A3Q01955 1670 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 ARHGEF37A1IGU5 675 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 ANHXE9PGG2 379 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 M0QZQ0 153 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 NRG2O14511 850 aaPredicted RBP8.51□□□□□ -1.05
CDH3-209ENST00000569080 SPTLC2O15270 562 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 ABLIM3O94929 683 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 VNN2O95498 520 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 F13A1P00488 732 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 ZSCAN22P10073 491 aaPredicted RBP8.51□□□□□ -1.05
CDH3-209ENST00000569080 GAP43P17677 238 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 CYP3A5P20815 502 aa8.51□□□□□ -1.05
CDH3-209ENST00000569080 ABCD1P33897 745 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms