RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	TBC1D15	Q8TC07	691 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	LINC00476	Q8WZB0	136 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	MTMR8	Q96EF0	704 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	TMX3	Q96JJ7	454 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001		Q96MF0	132 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	C7orf25	Q9BPX7	421 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	TLR10	Q9BXR5	811 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	TOR3A	Q9H497	397 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	SPC25	Q9HBM1	224 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	VSX1	Q9NZR4	365 aa	Predicted RBP	4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	MCM8	Q9UJA3	840 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	TRHDE	Q9UKU6	1024 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	LIMCH1	Q9UPQ0	1083 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	ATP8A1	Q9Y2Q0	1164 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	PRKAB1	Q9Y478	270 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001	NOX1	Q9Y5S8	564 aa		4.11	□□□□□ -1.75
BBS4-215	ENST00000569001		K7ESF4	209 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	MGST3	O14880	152 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	PPFIA4	O75335	1185 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	GPANK1	O95872	356 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	HLA-DOA	P06340	250 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	FCER1A	P12319	257 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	ZNF280A	P59817	542 aa	Predicted RBP	4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	PURA	Q00577	322 aa	Known RBP	4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	SLFN5	Q08AF3	891 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	MTMR1	Q13613	665 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	CASKIN2	Q8WXE0	1202 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	KAT5	Q92993	513 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	RNPEP	Q9H4A4	650 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	MKS1	Q9NXB0	559 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	SERPINB13	Q9UIV8	391 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	SLC45A2	Q9UMX9	530 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	MTO1	Q9Y2Z2	717 aa	Known RBP	4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	SBNO2	Q9Y2G9	1366 aa		4.1	□□□□□ -1.75
BBS4-215	ENST00000569001	TRIM75P	A6NK02	468 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	FAM171A2	A8MVW0	826 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	FZD9	O00144	591 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	PPFIA2	O75334	1257 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	ERN1	O75460	977 aa	Known RBP	4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	RHOBTB3	O94955	611 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	FOS	P01100	380 aa	Predicted RBP	4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	HKR1	P10072	659 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	CKB	P12277	381 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	EDNRB	P24530	442 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	MPL	P40238	635 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	GUCY2F	P51841	1108 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	AMPD3	Q01432	767 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	ITK	Q08881	620 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	CYP2A13	Q16696	494 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	FLYWCH1	Q4VC44	716 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	DPY19L2P1	Q6NXN4	242 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	NSUN7	Q8NE18	718 aa	Known RBP	4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	NTN5	Q8WTR8	489 aa	Predicted RBP	4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	FAXDC2	Q96IV6	333 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	REXO4	Q9GZR2	422 aa	Known RBP	4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	R3HDML	Q9H3Y0	253 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	RSAD1	Q9HA92	442 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	CASS4	Q9NQ75	786 aa		4.09	□□□□□ -1.75
BBS4-215	ENST00000569001	CCDC154	A6NI56	674 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	ZAR1L	A6NP61	321 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	GRM6	O15303	877 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	CDK11B	P21127	795 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	CXCR5	P32302	372 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	AVPR1B	P47901	424 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	KIF23	Q02241	960 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	CREM	Q03060	361 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	ODF1	Q14990	250 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	SPDYE7P	Q495Y7	208 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	ABHD17B	Q5VST6	288 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	SYDE2	Q5VT97	1194 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	RSPH3	Q86UC2	560 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	FITM2	Q8N6M3	262 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	IFI44	Q8TCB0	444 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	FBXO41	Q8TF61	875 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	TEKT5	Q96M29	485 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	BBC3	Q96PG8	261 aa	Predicted RBP	4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	SMAD5	Q99717	465 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	PUS7L	Q9H0K6	701 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	MANSC1	Q9H8J5	431 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	UNKL	Q9H9P5	680 aa	Known RBP	4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	TDP1	Q9NUW8	608 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	CDYL	Q9Y232	598 aa		4.08	□□□□□ -1.76
BBS4-215	ENST00000569001	LRRC14B	A6NHZ5	514 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	GABRD	O14764	452 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	HTRA2	O43464	458 aa	Predicted RBP	4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	AGFG2	O95081	481 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	ESRRB	O95718	433 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	FDXR	P22570	491 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	CTXN1	P60606	82 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	MXRA7	P84157	204 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	MPP3	Q13368	585 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	FOXR2	Q6PJQ5	311 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	ADGRG3	Q86Y34	549 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	PRPF38A	Q8NAV1	312 aa	Known RBP	4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	TMEM125	Q96AQ2	219 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	PTCD3	Q96EY7	689 aa	Known RBP	4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	CYFIP2	Q96F07	1278 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	GALNT9	Q9HCQ5	603 aa		4.07	□□□□□ -1.76

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