RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 CDKL5O76039 1030 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 PAPSS2O95340 614 aaPredicted RBP13.74□□□□□ -0.21
SNX29-207ENST00000568949 PRKCBP05771 671 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 ATF2P15336 505 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 IGFBP6P24592 240 aaPredicted RBP13.74□□□□□ -0.21
SNX29-207ENST00000568949 GDI1P31150 447 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 CLCNKBP51801 687 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
SNX29-207ENST00000568949 SATB1Q01826 763 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 TMEM132AQ24JP5 1023 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 DCAF4L1Q3SXM0 396 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 C1orf228Q6PIY5 440 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 VITQ6UXI7 678 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 PDZD4Q76G19 769 aaPredicted RBP13.74□□□□□ -0.21
SNX29-207ENST00000568949 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.74□□□□□ -0.21
SNX29-207ENST00000568949 TCEAL8Q8IYN2 117 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 OXER1Q8TDS5 423 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 SMARCD2Q92925 531 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 TCEAL4Q96EI5 215 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 MSANTD3Q96H12 275 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 CORO1BQ9BR76 489 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 TRPV4Q9HBA0 871 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 ANGPTL2Q9UKU9 493 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 FAM208BQ5VWN6 2430 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 STK36Q9NRP7 1315 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 CHURC1-FNTBB4DL54 471 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 PMLP29590 882 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 CCR2P41597 374 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 FNTBP49356 437 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 LIMK1P53667 647 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 PTGDRQ13258 359 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 LRRC32Q14392 662 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 GAS6Q14393 721 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 CALCRLQ16602 461 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 EARS2Q5JPH6 523 aaKnown RBP13.73□□□□□ -0.21
SNX29-207ENST00000568949 CYP4A22Q5TCH4 519 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 EEF1DP3Q658K8 133 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 MAEAQ7L5Y9 396 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 LONP2Q86WA8 852 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 LEMD2Q8NC56 503 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 E2F7Q96AV8 911 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 CCDC113Q9H0I3 377 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
SNX29-207ENST00000568949 GDAQ9Y2T3 454 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 SDK1Q7Z5N4 2213 aa13.73□□□□□ -0.21
SNX29-207ENST00000568949 H7C4K7 107 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 I3L4J1 428 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 NRG2O14511 850 aaPredicted RBP13.72□□□□□ -0.21
SNX29-207ENST00000568949 ZNF263O14978 683 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 SYN3O14994 580 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 GDF9O60383 454 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 REC8O95072 547 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 ATP2B1P20020 1258 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 HOXA6P31267 233 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 NAMPTP43490 491 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 BRCC3P46736 316 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 SHC2P98077 582 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 DMWDQ09019 674 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 STK3Q13188 491 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 GLRA4Q5JXX5 417 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 TPGS2Q68CL5 300 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 IL31Q6EBC2 164 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 IQCEQ6IPM2 695 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 SKAP1Q86WV1 359 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 MFSD6LQ8IWD5 586 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 ELMOD1Q8N336 334 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 C3orf58Q8NDZ4 430 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 DEPTORQ8TB45 409 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 CYP4F11Q9HBI6 524 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 MAFFQ9ULX9 164 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 INSL5Q9Y5Q6 135 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 CYP46A1Q9Y6A2 500 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 SPAG17Q6Q759 2223 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 GREB1Q4ZG55 1949 aa13.72□□□□□ -0.21
SNX29-207ENST00000568949 A0A087WWV3 80 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 FAM205CA6NFA0 338 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 K7ESF4 209 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 ARNTLO00327 626 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 MOSPD3O75425 235 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 SEC24AO95486 1093 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 CCNE1P24864 410 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 VIPR2P41587 438 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 EPHA5P54756 1037 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 SRSF5Q13243 272 aaKnown RBP13.71□□□□□ -0.21
SNX29-207ENST00000568949 MRPL58Q14197 206 aaKnown RBP13.71□□□□□ -0.21
SNX29-207ENST00000568949 APBB1IPQ7Z5R6 666 aaPredicted RBP13.71□□□□□ -0.21
SNX29-207ENST00000568949 ZSCAN18Q8TBC5 510 aaPredicted RBP13.71□□□□□ -0.21
SNX29-207ENST00000568949 BSNDQ8WZ55 320 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 ZNF512Q96ME7 567 aaPredicted RBP13.71□□□□□ -0.21
SNX29-207ENST00000568949 ZSWIM3Q96MP5 696 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 LARP6Q9BRS8 491 aaKnown RBP13.71□□□□□ -0.21
SNX29-207ENST00000568949 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 GPR88Q9GZN0 384 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 C8orf33Q9H7E9 229 aaPredicted RBP13.71□□□□□ -0.21
SNX29-207ENST00000568949 GOLGA2P5Q9HBQ8 144 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 TUFT1Q9NNX1 390 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 GJB4Q9NTQ9 266 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 USP20Q9Y2K6 914 aa13.71□□□□□ -0.21
SNX29-207ENST00000568949 PDCD11Q14690 1871 aaKnown RBP13.71□□□□□ -0.21
SNX29-207ENST00000568949 SMIM28A0A1B0GU29 152 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms