RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	TGM5	O43548	720 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	XYLB	O75191	536 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	EFEMP2	O95967	443 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	LDHA	P00338	332 aa	Known RBP	11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	WEE2	P0C1S8	567 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	SPATA31D3	P0C874	917 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	CXCL8	P10145	99 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	RPL17	P18621	184 aa	Known RBP	11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	CYP3A5	P20815	502 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	PAX3	P23760	479 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	NAB2	Q15742	525 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	UVSSA	Q2YD98	709 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	SLC10A6	Q3KNW5	377 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	RTP2	Q5QGT7	225 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	PPM1L	Q5SGD2	360 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	SPATA31D4	Q6ZUB0	917 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	RTL10	Q7L3V2	364 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	USP37	Q86T82	979 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	MAP4K3	Q8IVH8	894 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	CEP57L1	Q8IYX8	460 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	LNX1	Q8TBB1	728 aa	Predicted RBP	11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	EDA	Q92838	391 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	DHX58	Q96C10	678 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	MFSD14A	Q96MC6	490 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	LRFN3	Q9BTN0	628 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	MAGEF1	Q9HAY2	307 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	TBC1D7	Q9P0N9	293 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	AGO2	Q9UKV8	859 aa	Known RBP	11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	POLI	Q9UNA4	740 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782	VWA8	A3KMH1	1905 aa		11.28	□□□□□ -0.6
UBR1-207	ENST00000568782		A0A0B4J269	797 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	FAM86C2P	A6NEL3	165 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	MYMK	A6NI61	221 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	ABLIM1	O14639	778 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	MYB	P10242	640 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	FGFR3	P22607	806 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	GBP2	P32456	591 aa	Predicted RBP	11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	OR1D2	P34982	312 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	ASIC1	P78348	528 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	KRT85	P78386	507 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	POU5F1	Q01860	360 aa	Known RBP	11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	MTMR3	Q13615	1198 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	DSTYK	Q6XUX3	929 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	UBALD2	Q8IYN6	164 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	NOC3L	Q8WTT2	800 aa	Known RBP	11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	ZMAT2	Q96NC0	199 aa	Known RBP	11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	CLSTN3	Q9BQT9	956 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	RHOBTB2	Q9BYZ6	727 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	PRKD2	Q9BZL6	878 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	CXCL16	Q9H2A7	254 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	ASB7	Q9H672	318 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	OLFML3	Q9NRN5	406 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	DERA	Q9Y315	318 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	BACE2	Q9Y5Z0	518 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	CDY1	Q9Y6F8	540 aa		11.27	□□□□□ -0.61
UBR1-207	ENST00000568782	TTC26	A0AVF1	554 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	LACTBL1	A8MY62	500 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	C2CD4D	B7Z1M9	353 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	PRRG1	O14668	218 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	POLR2D	O15514	142 aa	Known RBP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	ZMYND10	O75800	440 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	IL18RAP	O95256	599 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	LRG1	P02750	347 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	C8A	P07357	584 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	TKT	P29401	623 aa	Known RBP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	TNFSF9	P41273	254 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	BRCC3	P46736	316 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	ACOT2	P49753	483 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	ARPP19	P56211	112 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	ZXDA	P98168	799 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	SOX4	Q06945	474 aa	Predicted RBP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	RAB33A	Q14088	237 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	TMEM132D	Q14C87	1099 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	PTPN21	Q16825	1174 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	CTXN3	Q4LDR2	81 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	L1TD1	Q5T7N2	865 aa	Known RBP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	ZNF280D	Q6N043	979 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	KANK3	Q6NY19	840 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	SUGP1	Q8IWZ8	645 aa	Known RBP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	ZDHHC14	Q8IZN3	488 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	ELMOD1	Q8N336	334 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	LRRC15	Q8TF66	581 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	CACTIN	Q8WUQ7	758 aa	Known RBP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	PBXIP1	Q96AQ6	731 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	C18orf25	Q96B23	403 aa	Predicted RBP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	DNAJC19	Q96DA6	116 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	CCDC34	Q96HJ3	373 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	SPATA32	Q96LK8	384 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	WDR6	Q9NNW5	1121 aa	Known RBP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	MTRR	Q9UBK8	725 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	LIMD1	Q9UGP4	676 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	SORCS3	Q9UPU3	1222 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782	BDP1	A6H8Y1	2624 aa		11.26	□□□□□ -0.61
UBR1-207	ENST00000568782		I3L4J1	428 aa		11.25	□□□□□ -0.61

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