RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 RMDN3Q96TC7 470 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 C11orf84Q9BUA3 381 aaPredicted RBP6.53□□□□□ -1.36
CDH13-211ENST00000568770 LMAN2LQ9H0V9 348 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 CPVLQ9H3G5 476 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 TOMM22Q9NS69 142 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 ANAPC4Q9UJX5 808 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 DDX19BQ9UMR2 479 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 C17orf102A2RUQ5 167 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 B2RBV5 119 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 H0Y858 1186 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 CCER2I3L3R5 266 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 STK10O94804 968 aaKnown RBP6.52□□□□□ -1.37
CDH13-211ENST00000568770 MMP1P03956 469 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 CEACAM5P06731 702 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 GOLGA8HP0CJ92 632 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 SMIM10L2AP0DMW4 78 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 SMIM10L2BP0DMW5 78 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 SNHG28P0DPA3 235 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 DNAJB1P25685 340 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 AVPR2P30518 371 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 SSTR4P31391 388 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 PMS1P54277 932 aaKnown RBP6.52□□□□□ -1.37
CDH13-211ENST00000568770 RRP1P56182 461 aaKnown RBP6.52□□□□□ -1.37
CDH13-211ENST00000568770 SIGLEC14Q08ET2 396 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 CBX2Q14781 532 aaPredicted RBP6.52□□□□□ -1.37
CDH13-211ENST00000568770 SF3A1Q15459 793 aaKnown RBP6.52□□□□□ -1.37
CDH13-211ENST00000568770 CPSF6Q16630 551 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDH13-211ENST00000568770 AXDND1Q5T1B0 1012 aaPredicted RBP6.52□□□□□ -1.37
CDH13-211ENST00000568770 VPS53Q5VIR6 699 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 ZNF746Q6NUN9 644 aaPredicted RBP6.52□□□□□ -1.37
CDH13-211ENST00000568770 C22orf34Q6ZV56 151 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 ADGRD2Q7Z7M1 963 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 DTWD2Q8NBA8 298 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 SMRP1Q8NCR6 262 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 APBB2Q92870 758 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 ASIC4Q96FT7 647 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 SPATA33Q96N06 139 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 C16orf70Q9BSU1 422 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 FSD1Q9BTV5 496 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 UBA5Q9GZZ9 404 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 MAF1Q9H063 256 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 IRF2BPLQ9H1B7 796 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 RC3H2Q9HBD1 1191 aaKnown RBP6.52□□□□□ -1.37
CDH13-211ENST00000568770 PXMP2Q9NR77 195 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 TLR9Q9NR96 1032 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 ST7Q9NRC1 585 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 TCP11L1Q9NUJ3 509 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 ACTR10Q9NZ32 417 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 CLEC1BQ9P126 229 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 RWDD3Q9Y3V2 267 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 ST14Q9Y5Y6 855 aa6.52□□□□□ -1.37
CDH13-211ENST00000568770 ABCB11O95342 1321 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 ADGRA3Q8IWK6 1321 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 GVINP1Q7Z2Y8 2422 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 KMT2BQ9UMN6 2715 aaPredicted RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 SHISA3A0PJX4 238 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 SHOXO15266 292 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 CAND2O75155 1236 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 GGPS1O95749 300 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 MYCLP12524 364 aaPredicted RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 HOXC8P31273 242 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 NRIP1P48552 1158 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 SP2Q02086 613 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 COASYQ13057 564 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 BTG3Q14201 252 aaPredicted RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 CDC37Q16543 378 aaPredicted RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 CELF3Q5SZQ8 465 aaKnown RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 GPATCH4Q5T3I0 446 aaKnown RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 CDKAL1Q5VV42 579 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 LARP1BQ659C4 914 aaKnown RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 ASCL5Q7RTU5 278 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 MFSD4AQ8N468 514 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 EFHBQ8N7U6 833 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 RPGRIP1Q96KN7 1286 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 DHRS1Q96LJ7 313 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 HSPA12BQ96MM6 686 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 DUSP15Q9H1R2 295 aaPredicted RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 RNPEPQ9H4A4 650 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 SETD4Q9NVD3 440 aa6.51□□□□□ -1.37
CDH13-211ENST00000568770 BARX2Q9UMQ3 279 aaPredicted RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 USP15Q9Y4E8 981 aaPredicted RBP6.51□□□□□ -1.37
CDH13-211ENST00000568770 EVPLQ92817 2033 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 PROB1E7EW31 1015 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 ENPP3O14638 875 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 GLP2RO95838 553 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 CFBP00751 764 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 PDGFBP01127 241 aaPredicted RBP6.5□□□□□ -1.37
CDH13-211ENST00000568770 CHRNA1P02708 482 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 LGALS2P05162 132 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 ITGB1P05556 798 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 HSPD1P10809 573 aaKnown RBP6.5□□□□□ -1.37
CDH13-211ENST00000568770 UBA1P22314 1058 aaKnown RBP6.5□□□□□ -1.37
CDH13-211ENST00000568770 CD96P40200 585 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 KIR3DL1P43629 444 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 CD97P48960 835 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 BNIP3Q12983 259 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 QRICH1Q2TAL8 776 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 GNPTABQ3T906 1256 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 KCNV1Q6PIU1 500 aa6.5□□□□□ -1.37
CDH13-211ENST00000568770 C6orf15Q6UXA7 325 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms