RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 TPGS2Q68CL5 300 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 CD300LGQ6UXG3 332 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 ELMOD1Q8N336 334 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 NECAB1Q8N987 351 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 ZFP14Q9HCL3 533 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 HEBP1Q9NRV9 189 aa17.29■□□□□ 0.36
HERPUD1-215ENST00000568676 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 RPL9P32969 192 aaKnown RBP17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 PRSS36Q5K4E3 855 aa17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 CYP4A22Q5TCH4 519 aa17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 NT5DC1Q5TFE4 455 aa17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 TANGO2Q6ICL3 276 aa17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 ALKAL1Q6UXT8 129 aa17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 PDZD4Q76G19 769 aaPredicted RBP17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 TRMT61BQ9BVS5 477 aaKnown RBP17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 BRD9Q9H8M2 597 aa17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 GMEB2Q9UKD1 530 aa17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.28■□□□□ 0.36
HERPUD1-215ENST00000568676 WDR87Q6ZQQ6 2873 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 NOTCH4Q99466 2003 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 WDR27A2RRH5 827 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 EIF5BO60841 1220 aaKnown RBP17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 EDN1P05305 212 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 KCNE1P15382 129 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 CEBPBP17676 345 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 BRCC3P46736 316 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 MLLT6P55198 1093 aaPredicted RBP17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 FZD5Q13467 585 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 IQCEQ6IPM2 695 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 C1orf228Q6PIY5 440 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 C3orf58Q8NDZ4 430 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 DEPDC1BQ8WUY9 529 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 E2F7Q96AV8 911 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 MSANTD3Q96H12 275 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 RTKNQ9BST9 563 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 MRPL4Q9BYD3 311 aaKnown RBP17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 PLA2G2FQ9BZM2 168 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 GPR88Q9GZN0 384 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 BHMT2Q9H2M3 363 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 CHRDQ9H2X0 955 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 TMEM134Q9H6X4 195 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 CYP4F11Q9HBI6 524 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 CDV3Q9UKY7 258 aaKnown RBP17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 RAB23Q9ULC3 237 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 RBM19Q9Y4C8 960 aaKnown RBP17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 NUB1Q9Y5A7 615 aa17.27■□□□□ 0.36
HERPUD1-215ENST00000568676 CEP250Q9BV73 2442 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 PODXLO00592 558 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 DTNBO60941 627 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 PSMC3P17980 439 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 FCARP24071 287 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 TRAPPC10P48553 1259 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 FXR2P51116 673 aaKnown RBP eCLIP17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 CCR3P51677 355 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 MTAPQ13126 283 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 MRPL58Q14197 206 aaKnown RBP17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 ZNF568Q3ZCX4 644 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 CELF5Q8N6W0 485 aaKnown RBP17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 ASB16Q96NS5 453 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 ACO2Q99798 780 aaKnown RBP17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 CORO1BQ9BR76 489 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 KIFC3Q9BVG8 833 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 OXCT2Q9BYC2 517 aaPredicted RBP17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 CDT1Q9H211 546 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 FOXP1Q9H334 677 aaPredicted RBP17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 C17orf75Q9HAS0 396 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 GOLGA2P5Q9HBQ8 144 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 PTPRHQ9HD43 1115 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 KCNG1Q9UIX4 513 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 USP20Q9Y2K6 914 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 INSL5Q9Y5Q6 135 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 FRYLO94915 3013 aa17.26■□□□□ 0.35
HERPUD1-215ENST00000568676 I3L4J1 428 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 MCF2P10911 925 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 CCT6AP40227 531 aaKnown RBP17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 ATXN1P54253 815 aaKnown RBP17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 DMP1Q13316 513 aaPredicted RBP17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 PDIA5Q14554 519 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 FAM78AQ5JUQ0 283 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 ZNF280DQ6N043 979 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 MAP4K3Q8IVH8 894 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 APPL2Q8NEU8 664 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 SMARCD2Q92925 531 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 DRC1Q96MC2 740 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 ZNF512Q96ME7 567 aaPredicted RBP17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 ACAP3Q96P50 834 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 TRPV4Q9HBA0 871 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 ZNF334Q9HCZ1 680 aaPredicted RBP17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 CNTN3Q9P232 1028 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 AFF4Q9UHB7 1163 aaKnown RBP17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 COL4A3Q01955 1670 aa17.25■□□□□ 0.35
HERPUD1-215ENST00000568676 JAK2O60674 1132 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 LRP3O75074 770 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 LARGE1O95461 756 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 IGFBP6P24592 240 aaPredicted RBP17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 EPHA5P54756 1037 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 SOX4Q06945 474 aaPredicted RBP17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 CTXN3Q4LDR2 81 aa17.24■□□□□ 0.35
HERPUD1-215ENST00000568676 LAIR1Q6GTX8 287 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms