RNA–Protein interactions for RNA: ENST00000568382.5

SCAPER-219, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-219	ENST00000568382	GLUD2	P49448	558 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	ACOT2	P49753	483 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	ASIC1	P78348	528 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	ZBTB6	Q15916	424 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	USP41	Q3LFD5	358 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	KIAA1841	Q6NSI8	718 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	ANKRD54	Q6NXT1	300 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	STXBP4	Q6ZWJ1	553 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	TMEM130	Q8N3G9	435 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	C3orf58	Q8NDZ4	430 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	ENGASE	Q8NFI3	743 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	DDX27	Q96GQ7	796 aa	Known RBP	13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	PAGE5	Q96GU1	130 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	UHRF1	Q96T88	793 aa	Predicted RBP	13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	EMILIN2	Q9BXX0	1053 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	RXFP1	Q9HBX9	757 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	AGO2	Q9UKV8	859 aa	Known RBP	13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	EXOC7	Q9UPT5	735 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	VWA8	A3KMH1	1905 aa		13.39	□□□□□ -0.27
SCAPER-219	ENST00000568382	PLXNA3	P51805	1871 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	PVALEF	A0A1B0GWK0	134 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	TMEM189-UBE2V1	I3L0A0	370 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	TEX28	O15482	410 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	KIF20A	O95235	890 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	UROD	P06132	367 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	EPCAM	P16422	314 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	HOXD13	P35453	343 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	EHHADH	Q08426	723 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	SMAD4	Q13485	552 aa	Known RBP	13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	SNW1	Q13573	536 aa	Known RBP	13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	ALCAM	Q13740	583 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	POSTN	Q15063	836 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	RTP2	Q5QGT7	225 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	FAM171A1	Q5VUB5	890 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	SYCE2	Q6PIF2	218 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	UNC13D	Q70J99	1090 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	CEP57	Q86XR8	500 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	SYCP3	Q8IZU3	236 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	SMRP1	Q8NCR6	262 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	ZNF507	Q8TCN5	953 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	RIN2	Q8WYP3	895 aa	Predicted RBP	13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	POMGNT1	Q8WZA1	660 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	CASP10	Q92851	521 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	S1PR5	Q9H228	398 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	GOLPH3L	Q9H4A5	285 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	RPF1	Q9H9Y2	349 aa	Known RBP	13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	TUBGCP4	Q9UGJ1	667 aa		13.38	□□□□□ -0.27
SCAPER-219	ENST00000568382	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.38	□□□□□ -0.27	3e-15	■■■■■ 344.6
SCAPER-219	ENST00000568382	PODXL	O00592	558 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	SRGAP2B	P0DMP2	458 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	RPL9	P32969	192 aa	Known RBP	13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	BRCC3	P46736	316 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	CLCN4	P51793	760 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	PPP2R3A	Q06190	1150 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	PSMD2	Q13200	908 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	SMAD2	Q15796	467 aa	Known RBP	13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	FAM26F	Q5R3K3	315 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	PPFIBP1	Q86W92	1011 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	ZSWIM2	Q8NEG5	633 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	FAM212A	Q96EL1	285 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	KIF12	Q96FN5	646 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	GSDMA	Q96QA5	445 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	TTPAL	Q9BTX7	342 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	APOL5	Q9BWW9	433 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	NUP62CL	Q9H1M0	184 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382	TMEM206	Q9H813	350 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382		A0A0C4DFX4	3053 aa		13.37	□□□□□ -0.27
SCAPER-219	ENST00000568382		I3L4J1	428 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	KLRC4	O43908	158 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	HOXB8	P17481	243 aa	Predicted RBP	13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	RPL17	P18621	184 aa	Known RBP	13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	CYP3A5	P20815	502 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	GART	P22102	1010 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	FGFR3	P22607	806 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	ELAVL2	Q12926	359 aa	Known RBP	13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	NFKBIB	Q15653	356 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	KLHL40	Q2TBA0	621 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	JADE1	Q6IE81	842 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	CD302	Q8IX05	232 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	GPR65	Q8IYL9	337 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	C12orf76	Q8N812	135 aa	Predicted RBP	13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	LNX1	Q8TBB1	728 aa	Predicted RBP	13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	SMARCE1	Q969G3	411 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	PHF12	Q96QT6	1004 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	TSPAN18	Q96SJ8	248 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	PCIF1	Q9H4Z3	704 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	CD320	Q9NPF0	282 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	EXOC1	Q9NV70	894 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	FNIP2	Q9P278	1114 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	FAM50B	Q9Y247	325 aa		13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	USP15	Q9Y4E8	981 aa	Predicted RBP	13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.36	□□□□□ -0.27
SCAPER-219	ENST00000568382	VCAN	P13611	3396 aa		13.35	□□□□□ -0.27
SCAPER-219	ENST00000568382	EIF3D	O15371	548 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
SCAPER-219	ENST00000568382	TRAPPC3	O43617	180 aa		13.35	□□□□□ -0.27
SCAPER-219	ENST00000568382	ADH1A	P07327	375 aa		13.35	□□□□□ -0.27

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