RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 SPATA31C1P0DKV0 1188 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 CYP11B2P19099 503 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 AVPR2P30518 371 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 GBP2P32456 591 aaPredicted RBP5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 NAMPTP43490 491 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 MRE11P49959 708 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 SCNN1GP51170 649 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 YARSP54577 528 aaKnown RBP5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 DSG1Q02413 1049 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 NHLH1Q02575 133 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 KCNH2Q12809 1159 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 GRIK3Q13003 919 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 TUSC3Q13454 348 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 TDGQ13569 410 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 FAM187BQ17R55 369 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 EML3Q32P44 896 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 DCAF4L1Q3SXM0 396 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 KRT79Q5XKE5 535 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 MCTP1Q6DN14 999 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 FUT10Q6P4F1 479 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 DTHD1Q6ZMT9 781 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 NUDT18Q6ZVK8 323 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 TMEM173Q86WV6 379 aaPredicted RBP5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 CEP57Q86XR8 500 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 PALB2Q86YC2 1186 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 NOSTRINQ8IVI9 506 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 GPR65Q8IYL9 337 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 RDH13Q8NBN7 331 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 FBXO18Q8NFZ0 1043 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 RIN2Q8WYP3 895 aaPredicted RBP5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 ATOH1Q92858 354 aaPredicted RBP5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 PMM1Q92871 262 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 ZFP42Q96MM3 310 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 DUSP9Q99956 384 aaKnown RBP5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 HERC2P3Q9BVR0 1158 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 TMEM60Q9H2L4 133 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 NXF3Q9H4D5 531 aaKnown RBP5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 XPNPEP1Q9NQW7 623 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 MAN1C1Q9NR34 630 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 KLK14Q9P0G3 267 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 FNIP2Q9P278 1114 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 IGSF9Q9P2J2 1179 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 ADAM28Q9UKQ2 775 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 PRKAB1Q9Y478 270 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 SF3B1O75533 1304 aaKnown RBP eCLIP5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 PHLPP2Q6ZVD8 1323 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 ZMYM2Q9UBW7 1377 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 PLXNA3P51805 1871 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 DOCK6Q96HP0 2047 aa5.13□□□□□ -1.59
HERPUD1-213ENST00000568358 TEX28O15482 410 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 B4GALT5O43286 388 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 FAM13AO94988 1023 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 F12P00748 615 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 ASGR2P07307 311 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 SPATA31D3P0C874 917 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 DNAJA1P31689 397 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 CLCN5P51795 746 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 AFF1P51825 1210 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 SMTNP53814 917 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 RACK1P63244 317 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 DSC1Q08554 894 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 STRN3Q13033 797 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 DMP1Q13316 513 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 HSP90AA2PQ14568 343 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 ZRSR1Q15695 479 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 LIN9Q5TKA1 542 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 FAM171A1Q5VUB5 890 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 KIAA0319Q5VV43 1072 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 CDCA2Q69YH5 1023 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 KANK3Q6NY19 840 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 SPATA31D4Q6ZUB0 917 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 TAS1R1Q7RTX1 841 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 CDR2LQ86X02 465 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 CMASQ8NFW8 434 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 SNX29Q8TEQ0 813 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 BCL7CQ8WUZ0 217 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 SMG7Q92540 1137 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 TATDN2Q93075 761 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 NXPE3Q969Y0 559 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 ASIC4Q96FT7 647 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 CDK5RAP3Q96JB5 506 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 UROC1Q96N76 676 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 FAM129BQ96TA1 746 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 TCHPQ9BT92 498 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 TTPALQ9BTX7 342 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 TIPINQ9BVW5 301 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 CCDC94Q9BW85 323 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 VN1R3Q9BXE9 311 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 BHMT2Q9H2M3 363 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 FZD8Q9H461 694 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 RXFP1Q9HBX9 757 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 SRA1Q9HD15 236 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 WDR6Q9NNW5 1121 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 GPRC5CQ9NQ84 441 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 TOPORSQ9NS56 1045 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 CHST7Q9NS84 486 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 DDX19AQ9NUU7 478 aaKnown RBP5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 SLC38A7Q9NVC3 462 aa5.12□□□□□ -1.59
HERPUD1-213ENST00000568358 MIOSQ9NXC5 875 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms