RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 VARS2Q5ST30 1063 aaKnown RBP16.5■□□□□ 0.23
COMMD4-223ENST00000568301 SLC8B1Q6J4K2 584 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 NPAS3Q8IXF0 933 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 FAM184AQ8NB25 1140 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 C3orf58Q8NDZ4 430 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 NTPCRQ9BSD7 190 aaKnown RBP16.5■□□□□ 0.23
COMMD4-223ENST00000568301 MRPL4Q9BYD3 311 aaKnown RBP16.5■□□□□ 0.23
COMMD4-223ENST00000568301 CDT1Q9H211 546 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 AVENQ9NQS1 362 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-223ENST00000568301 GDE1Q9NZC3 331 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 FBXO4Q9UKT5 387 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 MRPS23Q9Y3D9 190 aaKnown RBP16.5■□□□□ 0.23
COMMD4-223ENST00000568301 SPTBN2O15020 2390 aa16.5■□□□□ 0.23
COMMD4-223ENST00000568301 ARHGEF37A1IGU5 675 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 LAD1O00515 517 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 KCNE1P15382 129 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 RPL9P32969 192 aaKnown RBP16.49■□□□□ 0.23
COMMD4-223ENST00000568301 BRCC3P46736 316 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 TOB1P50616 345 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-223ENST00000568301 CACNA1BQ00975 2339 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 SOX4Q06945 474 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-223ENST00000568301 DMP1Q13316 513 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-223ENST00000568301 ZNF568Q3ZCX4 644 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 DAW1Q8N136 415 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 CEP120Q8N960 986 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 SNX29Q8TEQ0 813 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 BORCS6Q96GS4 357 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 DRC1Q96MC2 740 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 GOLGA2P5Q9HBQ8 144 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 LTB4R2Q9NPC1 389 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 SH2B1Q9NRF2 756 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-223ENST00000568301 ARHGAP28Q9P2N2 729 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 NCDNQ9UBB6 729 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 KCNG1Q9UIX4 513 aa16.49■□□□□ 0.23
COMMD4-223ENST00000568301 ZFHX4Q86UP3 3567 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 TPRP12270 2363 aaKnown RBP16.48■□□□□ 0.23
COMMD4-223ENST00000568301 E9PMD0 336 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 I3L4J1 428 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 SYN3O14994 580 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 TBC1D4O60343 1298 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 ECI2O75521 394 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 MCF2P10911 925 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 PTPN2P17706 415 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 PROZP22891 400 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 ELF1P32519 619 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 NBR1Q14596 966 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 KRT79Q5XKE5 535 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 ATRIPQ8WXE1 791 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 ING5Q8WYH8 240 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 ZMAT2Q96NC0 199 aaKnown RBP16.48■□□□□ 0.23
COMMD4-223ENST00000568301 ACAP3Q96P50 834 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 NELL2Q99435 816 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 TCHPQ9BT92 498 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 TARS2Q9BW92 718 aaKnown RBP16.48■□□□□ 0.23
COMMD4-223ENST00000568301 KMT5AQ9NQR1 393 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 PCDHB6Q9Y5E3 794 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 PCDHGA2Q9Y5H1 932 aa16.48■□□□□ 0.23
COMMD4-223ENST00000568301 KMT2BQ9UMN6 2715 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-223ENST00000568301 MYH11P35749 1972 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 H7C4K7 107 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 PODXLO00592 558 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 SPTLC1O15269 473 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 HIP1RO75146 1068 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 RHOP08100 348 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 ATF2P15336 505 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 TARSP26639 723 aaKnown RBP16.47■□□□□ 0.23
COMMD4-223ENST00000568301 PRPHP41219 470 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 MAGEA9P43362 315 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 OSTNP61366 133 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 ROR1Q01973 937 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 MRPL58Q14197 206 aaKnown RBP16.47■□□□□ 0.23
COMMD4-223ENST00000568301 ZBTB41Q5SVQ8 909 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 RINT1Q6NUQ1 792 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 POTEHQ6S545 545 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 TSSK4Q6SA08 328 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 C1orf186Q6ZWK4 172 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 TAS1R3Q7RTX0 852 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 TCEAL8Q8IYN2 117 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 KCTD17Q8N5Z5 321 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 ZBTB44Q8NCP5 570 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 CNTNAP3BQ96NU0 1288 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 TIPINQ9BVW5 301 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 CNTNAP3Q9BZ76 1288 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 PLA2G2FQ9BZM2 168 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 ZSCAN32Q9NX65 697 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 CNTN3Q9P232 1028 aa16.47■□□□□ 0.23
COMMD4-223ENST00000568301 WDR27A2RRH5 827 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 ABLIM1O14639 778 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 PRRG1O14668 218 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 MICAL2O94851 1124 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 LRG1P02750 347 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 ATXN1P54253 815 aaKnown RBP16.46■□□□□ 0.23
COMMD4-223ENST00000568301 MAPK7Q13164 816 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 IL17AQ16552 155 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 SLC5A9Q2M3M2 681 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 TPGS2Q68CL5 300 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 MPZL3Q6UWV2 235 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 DTHD1Q6ZMT9 781 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 TPRG1Q6ZUI0 275 aa16.46■□□□□ 0.23
COMMD4-223ENST00000568301 SPIRE2Q8WWL2 714 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms