RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 EFCAB8A8MWE9 144 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 CTAGE8P0CG41 777 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 RARBP10826 455 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 AP3M2P53677 418 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 PURAQ00577 322 aaKnown RBP7.59□□□□□ -1.2
SMG1-215ENST00000568239 AMPD2Q01433 879 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 IRF5Q13568 498 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 CUL2Q13617 745 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 IFI16Q16666 785 aaKnown RBP7.59□□□□□ -1.2
SMG1-215ENST00000568239 FAM187BQ17R55 369 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 SRGAP1Q7Z6B7 1085 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 CTAGE6Q86UF2 777 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 CTAGE4Q8IX94 777 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 TMEM130Q8N3G9 435 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 APOL6Q9BWW8 343 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 TRIM6Q9C030 488 aaPredicted RBP7.59□□□□□ -1.2
SMG1-215ENST00000568239 OSGEPQ9NPF4 335 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 Q9Y3F1 56 aa7.59□□□□□ -1.2
SMG1-215ENST00000568239 LACTBL1A8MY62 500 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 TADA3O75528 432 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 NPTXRO95502 500 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 NFICP08651 508 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 CLTAP09496 248 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 MCF2P10911 925 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 MCCD1P59942 119 aaPredicted RBP7.58□□□□□ -1.2
SMG1-215ENST00000568239 CAP1Q01518 475 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 TUBB2AQ13885 445 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 WHAMMP3Q1A5X7 153 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 ZNF699Q32M78 642 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 CCDC181Q5TID7 509 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 PAPD7Q5XG87 772 aaKnown RBP7.58□□□□□ -1.2
SMG1-215ENST00000568239 JADE1Q6IE81 842 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 DAAM2Q86T65 1068 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 GOLGA1Q92805 767 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 FAM81BQ96LP2 452 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 ACAP3Q96P50 834 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 PCDHB18PQ96TA0 734 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 TUBB2BQ9BVA1 445 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 RNF186Q9NXI6 227 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 HES2Q9Y543 173 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 A0A1B0GUA9 196 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 SMIM35A0A1B0GVV1 85 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 GRID2IPA4D2P6 1211 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 ATMINO43313 823 aaPredicted RBP7.58□□□□□ -1.2
SMG1-215ENST00000568239 GPR32O75388 356 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 WEE2P0C1S8 567 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 GNAT1P11488 350 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 CYBAP13498 195 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 PRKAR2AP13861 404 aaKnown RBP7.58□□□□□ -1.2
SMG1-215ENST00000568239 TBXAS1P24557 533 aaPredicted RBP7.58□□□□□ -1.2
SMG1-215ENST00000568239 RNASE9P60153 205 aaKnown RBP7.58□□□□□ -1.2
SMG1-215ENST00000568239 HTRA3P83110 453 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 CDR2Q01850 454 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 CACNB2Q08289 660 aaPredicted RBP7.58□□□□□ -1.2
SMG1-215ENST00000568239 ZNF710Q8N1W2 664 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 SLC35G2Q8TBE7 412 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 COG1Q8WTW3 980 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 SYT11Q9BT88 431 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 ADAMTS10Q9H324 1103 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 XPNPEP3Q9NQH7 507 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 RNF19AQ9NV58 838 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 CTTNBP2NLQ9P2B4 639 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 NOCTQ9UK39 431 aaKnown RBP7.58□□□□□ -1.2
SMG1-215ENST00000568239 SNX12Q9UMY4 172 aa7.58□□□□□ -1.2
SMG1-215ENST00000568239 PIN4Q9Y237 131 aaKnown RBP7.58□□□□□ -1.2
SMG1-215ENST00000568239 CITO14578 2027 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 MBLAC1A4D2B0 266 aaPredicted RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 ANKRD62A6NC57 917 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 SEPT4O43236 478 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 IL18RAPO95256 599 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 ASS1P00966 412 aaKnown RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 ITGB3P05106 788 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 CHRNB2P17787 502 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 EIF4BP23588 611 aaKnown RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 CCND3P30281 292 aaPredicted RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 GNA15P30679 374 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 GUCY2FP51841 1108 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 FMO1Q01740 532 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 SGSM1Q2NKQ1 1148 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 WDR72Q3MJ13 1102 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 PASD1Q8IV76 773 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 CD99L2Q8TCZ2 262 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 TMEM40Q8WWA1 233 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 ARHGEF26Q96DR7 871 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 OSBPL9Q96SU4 736 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 CCDC94Q9BW85 323 aaPredicted RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 HYOU1Q9Y4L1 999 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 PCDHB2Q9Y5E7 798 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 TRIP11Q15643 1979 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 TMEM110-MUSTN1A8MSY1 372 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 HAS3O00219 553 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 THAP12O43422 761 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 B4GALT4O60513 344 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 RTN2O75298 545 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 CTSHP09668 335 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 RHOXF2BP0C7M4 288 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 TMEM253P0C7T8 217 aa7.57□□□□□ -1.2
SMG1-215ENST00000568239 DARSP14868 501 aaKnown RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 IBSPP21815 317 aaPredicted RBP7.57□□□□□ -1.2
SMG1-215ENST00000568239 CDC42EP1Q00587 391 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms