RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 CCDC39Q9UFE4 941 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 WDR87Q6ZQQ6 2873 aa14.08□□□□□ -0.16
TSC2-220ENST00000568238 A0A087X0B3 334 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 NPHP3-ACAD11A0A0J9YXS1 232 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 ADAM12O43184 909 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 KCNE1P15382 129 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 FGFR3P22607 806 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 PTPN5P54829 565 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 SOX4Q06945 474 aaPredicted RBP14.07□□□□□ -0.16
TSC2-220ENST00000568238 TDGQ13569 410 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 ARSHQ5FYA8 562 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 RESP18Q5W5W9 173 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 ZPBP2Q6X784 338 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 GET4Q7L5D6 327 aaPredicted RBP14.07□□□□□ -0.16
TSC2-220ENST00000568238 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 PDILTQ8N807 584 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 C3orf58Q8NDZ4 430 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 LRRC15Q8TF66 581 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 BICD1Q96G01 975 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 DDX27Q96GQ7 796 aaKnown RBP14.07□□□□□ -0.16
TSC2-220ENST00000568238 ZMAT2Q96NC0 199 aaKnown RBP14.07□□□□□ -0.16
TSC2-220ENST00000568238 REEP2Q9BRK0 252 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 KCNK12Q9HB15 430 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 IGSF9Q9P2J2 1179 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 EPS15L1Q9UBC2 864 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 ODF2LQ9ULJ1 636 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 DUSP12Q9UNI6 340 aa14.07□□□□□ -0.16
TSC2-220ENST00000568238 I3L4J1 428 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 PODXLO00592 558 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 C8AP07357 584 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 HNRNPA1P09651 372 aaKnown RBP eCLIP14.06□□□□□ -0.16
TSC2-220ENST00000568238 IGFBP6P24592 240 aaPredicted RBP14.06□□□□□ -0.16
TSC2-220ENST00000568238 TKTP29401 623 aaKnown RBP14.06□□□□□ -0.16
TSC2-220ENST00000568238 AVPR2P30518 371 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 HOXA9P31269 272 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 STAT6P42226 847 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 MATR3P43243 847 aaKnown RBP eCLIP14.06□□□□□ -0.16
TSC2-220ENST00000568238 NCKAP1LP55160 1127 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 DHX8Q14562 1220 aaKnown RBP14.06□□□□□ -0.16
TSC2-220ENST00000568238 PPM1LQ5SGD2 360 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 RRAGBQ5VZM2 374 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 ZBTB45Q96K62 511 aaPredicted RBP14.06□□□□□ -0.16
TSC2-220ENST00000568238 MYADMQ96S97 322 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 MFSD1Q9H3U5 465 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 BLOC1S4Q9NUP1 217 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 FAM13BQ9NYF5 915 aa14.06□□□□□ -0.16
TSC2-220ENST00000568238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.06□□□□□ -0.16
TSC2-220ENST00000568238 K7ENM7 598 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 CLDN3O15551 220 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 XYLBO75191 536 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 FAM13AO94988 1023 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 KRT18P05783 430 aaKnown RBP14.05□□□□□ -0.16
TSC2-220ENST00000568238 SCP2P22307 547 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 RPL9P32969 192 aaKnown RBP14.05□□□□□ -0.16
TSC2-220ENST00000568238 OR1D2P34982 312 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 BRCC3P46736 316 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 MCL1Q07820 350 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 RAB33AQ14088 237 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 MCM6Q14566 821 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 ADALQ6DHV7 355 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 CD300LGQ6UXG3 332 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 CCDC73Q6ZRK6 1079 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 ANKS3Q6ZW76 656 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 HAUS6Q7Z4H7 955 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 FSIP1Q8NA03 581 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 SLC7A14Q8TBB6 771 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 RAD54LQ92698 747 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 C18orf25Q96B23 403 aaPredicted RBP14.05□□□□□ -0.16
TSC2-220ENST00000568238 DHX58Q96C10 678 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 PARVGQ9HBI0 331 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 BACE2Q9Y5Z0 518 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 CDY1Q9Y6F8 540 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 ANK1P16157 1881 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 NOTCH4Q99466 2003 aa14.05□□□□□ -0.16
TSC2-220ENST00000568238 A0A1B0GVL5 298 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 GOLGA6L4A6NEF3 574 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 HNRNPDLO14979 420 aaKnown RBP14.04□□□□□ -0.16
TSC2-220ENST00000568238 CCL16O15467 120 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 MEFVO15553 781 aaPredicted RBP14.04□□□□□ -0.16
TSC2-220ENST00000568238 TBCAO75347 108 aaKnown RBP14.04□□□□□ -0.16
TSC2-220ENST00000568238 POU2F2P09086 479 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 CXCL8P10145 99 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 PFKFB1P16118 471 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 FSHRP23945 695 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 CMA1P23946 247 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 LIG4P49917 911 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 ZNF131P52739 623 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 TCF15Q12870 199 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 SEZ6Q53EL9 994 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 VARS2Q5ST30 1063 aaKnown RBP14.04□□□□□ -0.16
TSC2-220ENST00000568238 RSPO2Q6UXX9 243 aaPredicted RBP14.04□□□□□ -0.16
TSC2-220ENST00000568238 GRASPQ7Z6J2 395 aaPredicted RBP14.04□□□□□ -0.16
TSC2-220ENST00000568238 ALYREFQ86V81 257 aaKnown RBP14.04□□□□□ -0.16
TSC2-220ENST00000568238 MYCT1Q8N699 235 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 LARP4BQ92615 738 aaKnown RBP14.04□□□□□ -0.16
TSC2-220ENST00000568238 KCNN1Q92952 543 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 NXPE3Q969Y0 559 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 STK17AQ9UEE5 414 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 FBXL21Q9UKT6 434 aa14.04□□□□□ -0.16
TSC2-220ENST00000568238 KCNH3Q9ULD8 1083 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms