RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	GLRA4	Q5JXX5	417 aa		12.54	□□□□□ -0.4
TCF4-238	ENST00000568169	PRSS36	Q5K4E3	855 aa		12.54	□□□□□ -0.4
TCF4-238	ENST00000568169	SLC8B1	Q6J4K2	584 aa		12.54	□□□□□ -0.4
TCF4-238	ENST00000568169	CATSPER3	Q86XQ3	398 aa		12.54	□□□□□ -0.4
TCF4-238	ENST00000568169	ZNF461	Q8TAF7	563 aa		12.54	□□□□□ -0.4
TCF4-238	ENST00000568169	UROC1	Q96N76	676 aa		12.54	□□□□□ -0.4
TCF4-238	ENST00000568169	NACC1	Q96RE7	527 aa		12.54	□□□□□ -0.4
TCF4-238	ENST00000568169	BRMS1	Q9HCU9	246 aa		12.54	□□□□□ -0.4
TCF4-238	ENST00000568169	PARD6A	Q9NPB6	346 aa		12.54	□□□□□ -0.4
TCF4-238	ENST00000568169	DNAH14	Q0VDD8	3507 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	DCDC2B	A2VCK2	349 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169		I3L4J1	428 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	MAN2B1	O00754	1011 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	TRAPPC3	O43617	180 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	MED24	O75448	989 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	MICAL2	O94851	1124 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	CYP11B2	P19099	503 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	BRCC3	P46736	316 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	ROR1	Q01973	937 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	FAM78A	Q5JUQ0	283 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	PADI6	Q6TGC4	694 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	C3orf58	Q8NDZ4	430 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	DEPTOR	Q8TB45	409 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	IER2	Q9BTL4	223 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	TMEM60	Q9H2L4	133 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	BRD9	Q9H8M2	597 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	ZFP14	Q9HCL3	533 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	TRPV5	Q9NQA5	729 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	GMEB2	Q9UKD1	530 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	USP18	Q9UMW8	372 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	FRYL	O94915	3013 aa		12.53	□□□□□ -0.4
TCF4-238	ENST00000568169	CHD8	Q9HCK8	2581 aa		12.52	□□□□□ -0.4
TCF4-238	ENST00000568169	WDR27	A2RRH5	827 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	BTBD18	B2RXH4	712 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	NRG2	O14511	850 aa	Predicted RBP	12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	LRG1	P02750	347 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	ATF2	P15336	505 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	LIG1	P18858	919 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	NRL	P54845	237 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	GRM2	Q14416	872 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	PPP2R5A	Q15172	486 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	XKR4	Q5GH76	650 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	NT5DC1	Q5TFE4	455 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	MAP4K3	Q8IVH8	894 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	TCEAL8	Q8IYN2	117 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	CELF5	Q8N6W0	485 aa	Known RBP	12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	TCEAL4	Q96EI5	215 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	POLR3C	Q9BUI4	534 aa	Predicted RBP	12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	TRMT61B	Q9BVS5	477 aa	Known RBP	12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	GOLGA2P5	Q9HBQ8	144 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	NDRG2	Q9UN36	371 aa	Known RBP	12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	ANK1	P16157	1881 aa		12.52	□□□□□ -0.41
TCF4-238	ENST00000568169	ZNF638	Q14966	1978 aa	Known RBP	12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	SMIM28	A0A1B0GU29	152 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	PRRG1	O14668	218 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	ZNF197	O14709	1029 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	SEC24A	O95486	1093 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	ADRB1	P08588	477 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	ELF1	P32519	619 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	CCR2	P41597	374 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	EFNA5	P52803	228 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	SOX4	Q06945	474 aa	Predicted RBP	12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	ATF7IP2	Q5U623	682 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	LAIR1	Q6GTX8	287 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	ALKAL1	Q6UXT8	129 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	IRF7	Q92985	503 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	ASB16	Q96NS5	453 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	CORO1B	Q9BR76	489 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	LMAN1L	Q9HAT1	526 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	RAB23	Q9ULC3	237 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	TNFSF13B	Q9Y275	285 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	INSL5	Q9Y5Q6	135 aa		12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.51	□□□□□ -0.41
TCF4-238	ENST00000568169	DENND4C	Q5VZ89	1909 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	ARHGEF35	A5YM69	484 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	SYN3	O14994	580 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	LRP3	O75074	770 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	PSMC3	P17980	439 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	RPA1	P27694	616 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	CCR3	P51677	355 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	SPEM2	Q0P670	501 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	MRPL58	Q14197	206 aa	Known RBP	12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	PPP2R5D	Q14738	602 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	LPAL2	Q16609	132 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	TPGS2	Q68CL5	300 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	VIT	Q6UXI7	678 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	DIS3L2	Q8IYB7	885 aa	Known RBP	12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	FAM3C	Q92520	227 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	SMARCD2	Q92925	531 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	ZSWIM3	Q96MP5	696 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	KIFC3	Q9BVG8	833 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	CYP4F11	Q9HBI6	524 aa		12.5	□□□□□ -0.41
TCF4-238	ENST00000568169	EML5	Q05BV3	1969 aa		12.49	□□□□□ -0.41
TCF4-238	ENST00000568169		H7C4K7	107 aa		12.49	□□□□□ -0.41
TCF4-238	ENST00000568169	SLC30A4	O14863	429 aa		12.49	□□□□□ -0.41
TCF4-238	ENST00000568169	MOSPD3	O75425	235 aa		12.49	□□□□□ -0.41
TCF4-238	ENST00000568169	RET	P07949	1114 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms