RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ZNF571Q7Z3V5 609 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-221ENST00000567935 RNF180Q86T96 592 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 ZNF410Q86VK4 478 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 ZSWIM2Q8NEG5 633 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 MNS1Q8NEH6 495 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 DHX38Q92620 1227 aaKnown RBP15.74■□□□□ 0.11
COMMD4-221ENST00000567935 LENG1Q96BZ8 264 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-221ENST00000567935 NOX5Q96PH1 765 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 CGRRF1Q99675 332 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 IRX2Q9BZI1 471 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-221ENST00000567935 UBE2TQ9NPD8 197 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-221ENST00000567935 STARD7Q9NQZ5 370 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 ANKFY1Q9P2R3 1169 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 ADAMTS1Q9UHI8 967 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 CDC23Q9UJX2 597 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 AJAP1Q9UKB5 411 aaPredicted RBP15.74■□□□□ 0.11
COMMD4-221ENST00000567935 COG5Q9UP83 839 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 TNFSF13BQ9Y275 285 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 CACNA1AO00555 2505 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 WDFY4Q6ZS81 3184 aa15.74■□□□□ 0.11
COMMD4-221ENST00000567935 A0A087X0T9 212 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 A0A0U1RQJ8 604 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 RCCD1A6NED2 376 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 FANCGO15287 622 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 KPNA6O60684 536 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 F2P00734 622 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 FAM228BP0C875 321 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 ZNF286BP0CG31 522 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 DLATP10515 647 aaKnown RBP15.73■□□□□ 0.11
COMMD4-221ENST00000567935 CLCN3P51790 818 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 NLRP11P59045 1033 aaKnown RBP15.73■□□□□ 0.11
COMMD4-221ENST00000567935 PRPF4BQ13523 1007 aaKnown RBP15.73■□□□□ 0.11
COMMD4-221ENST00000567935 PCBP1Q15365 356 aaKnown RBP eCLIP15.73■□□□□ 0.11
COMMD4-221ENST00000567935 GRIK4Q16099 956 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 WHAMMP3Q1A5X7 153 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 WDR44Q5JSH3 913 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 ALKBH5Q6P6C2 394 aaKnown RBP15.73■□□□□ 0.11
COMMD4-221ENST00000567935 GJB7Q6PEY0 223 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 MTHFD1LQ6UB35 978 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 CRELD2Q6UXH1 353 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-221ENST00000567935 WDR49Q8IV35 697 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 CEP112Q8N8E3 955 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 TRAPPC12Q8WVT3 735 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 ATRIPQ8WXE1 791 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 CALR3Q96L12 384 aaKnown RBP15.73■□□□□ 0.11
COMMD4-221ENST00000567935 NLRP4Q96MN2 994 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 TCHPQ9BT92 498 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 PPP1R12CQ9BZL4 782 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 GPR88Q9GZN0 384 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 AP5M1Q9H0R1 490 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 C1orf112Q9NSG2 853 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 NAGPAQ9UK23 515 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 NENFQ9UMX5 172 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 JRKLQ9Y4A0 524 aa15.73■□□□□ 0.11
COMMD4-221ENST00000567935 NRCAMQ92823 1304 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 A0A0A6YYK5 440 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-221ENST00000567935 INO80B-WBP1J3KQ70 363 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 TNNI1P19237 187 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 MBTD1Q05BQ5 628 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 ATF7IP2Q5U623 682 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 PAPD7Q5XG87 772 aaKnown RBP15.72■□□□□ 0.11
COMMD4-221ENST00000567935 APBB1IPQ7Z5R6 666 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-221ENST00000567935 SRGAP1Q7Z6B7 1085 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 TLK2Q86UE8 772 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 TMEM199Q8N511 208 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 TAS1R2Q8TE23 839 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 UBE2Q2Q8WVN8 375 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 SHC3Q92529 594 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 SYT11Q9BT88 431 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 KATNAL1Q9BW62 490 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 INO80BQ9C086 356 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-221ENST00000567935 PTPRHQ9HD43 1115 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 TRIM10Q9UDY6 481 aa15.72■□□□□ 0.11
COMMD4-221ENST00000567935 CNTNAP2Q9UHC6 1331 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 EFCAB8A8MWE9 144 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 DYNC1LI2O43237 492 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-221ENST00000567935 ADAMTS4O75173 837 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 IL18RAPO95256 599 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 C4BPAP04003 597 aaKnown RBP15.71■□□□□ 0.11
COMMD4-221ENST00000567935 H2AFZP0C0S5 128 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 MCF2P10911 925 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 PRLRP16471 622 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 TNFAIP3P21580 790 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 ACOT2P49753 483 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 IGBP1P78318 339 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 ARHGAP44Q17R89 818 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 KIAA0753Q2KHM9 967 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 H2AFVQ71UI9 128 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 ARHGEF19Q8IW93 802 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 FAM71AQ8IYT1 594 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 PPM1KQ8N3J5 372 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 SLC30A5Q8TAD4 765 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 HELQQ8TDG4 1101 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 SEMA4DQ92854 862 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 ZBTB45Q96K62 511 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-221ENST00000567935 HAPLN2Q9GZV7 340 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 AKT3Q9Y243 479 aa15.71■□□□□ 0.11
COMMD4-221ENST00000567935 MACROD2A1Z1Q3 448 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 EPOPA6NHQ4 379 aa15.7■□□□□ 0.1
COMMD4-221ENST00000567935 FOXN3O00409 490 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms