RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 MCL1Q07820 350 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 RESTQ13127 1097 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 PTPAQ15257 358 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 ZC2HC1CQ53FD0 456 aaPredicted RBP13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 PDXDC1Q6P996 788 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 CYP26C1Q6V0L0 522 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 ZPBP2Q6X784 338 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 DYMQ7RTS9 669 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 SIX5Q8N196 739 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 SLC44A3Q8N4M1 653 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 ITFG1Q8TB96 612 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 ING5Q8WYH8 240 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 KIF12Q96FN5 646 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 BACH2Q9BYV9 841 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 IKZF4Q9H2S9 585 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 KCND2Q9NZV8 630 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 IGSF9Q9P2J2 1179 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 EPS15L1Q9UBC2 864 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 ODF2LQ9ULJ1 636 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 TBX20Q9UMR3 447 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 DUSP12Q9UNI6 340 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 TIMM13Q9Y5L4 95 aaPredicted RBP13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 VWA8A3KMH1 1905 aa13.34□□□□□ -0.27
GTF3C1-208ENST00000567843 LACTBL1A8MY62 500 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 TISP43B9A030 160 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 STK25O00506 426 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 PI15O43692 258 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 TRAK2O60296 914 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 TBCAO75347 108 aaKnown RBP13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 BMP15O95972 392 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 PDCP20941 246 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 MCM4P33991 863 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 ROR1Q01973 937 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 ANKS3Q6ZW76 656 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 KCTD17Q8N5Z5 321 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 LARP4BQ92615 738 aaKnown RBP13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 ATOH1Q92858 354 aaPredicted RBP13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 RHOBTB2Q9BYZ6 727 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 PARVGQ9HBI0 331 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 DNMT3BQ9UBC3 853 aaKnown RBP13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 KCNG1Q9UIX4 513 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 FBXO2Q9UK22 296 aaPredicted RBP13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 CA14Q9ULX7 337 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 BACE2Q9Y5Z0 518 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 NUMBLQ9Y6R0 609 aa13.33□□□□□ -0.28
GTF3C1-208ENST00000567843 DOCK8Q8NF50 2099 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 WDR27A2RRH5 827 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 ANKRD63C9JTQ0 380 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 H0YCG3 227 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 XYLBO75191 536 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 C1RP00736 705 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 CLTAP09496 248 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 HNRNPA1P09651 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 NPR3P17342 541 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 RPL9P32969 192 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 CDR1P51861 262 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 ZNF131P52739 623 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 ENOX2Q16206 610 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 CTXN3Q4LDR2 81 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 FOXD4L5Q5VV16 416 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 CWF19L1Q69YN2 538 aaKnown RBP13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 SLC39A4Q6P5W5 647 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 PARM1Q6UWI2 310 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 GPR152Q8TDT2 470 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 FOXD4L4Q8WXT5 416 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 FGF14Q92915 247 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 MSTO1Q9BUK6 570 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 CCSER1Q9C0I3 900 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 CYP4F11Q9HBI6 524 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 TBC1D7Q9P0N9 293 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 FBXL5Q9UKA1 691 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 CDH7Q9ULB5 785 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 MTMR6Q9Y217 621 aa13.32□□□□□ -0.28
GTF3C1-208ENST00000567843 TTC26A0AVF1 554 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 KRBA1A5PL33 1030 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 PRRG1O14668 218 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 PPEF2O14830 753 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 SLC26A4O43511 780 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 PAPLNO95428 1278 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 SEC24AO95486 1093 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 ELF1P32519 619 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 DDIT3P35638 169 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 PPP2R3AQ06190 1150 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 HTR4Q13639 388 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 PABPC1LQ4VXU2 614 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 SFR1Q86XK3 245 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 DDX12PQ92771 950 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 FGF13Q92913 245 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 MCRS1Q96EZ8 462 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 SUSD3Q96L08 255 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 FIZ1Q96SL8 496 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 RPF1Q9H9Y2 349 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 SRPRBQ9Y5M8 271 aaKnown RBP13.31□□□□□ -0.28
GTF3C1-208ENST00000567843 MTCL1Q9Y4B5 1905 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms