RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 WDR49Q8IV35 697 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 ACTRT1Q8TDG2 376 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 DDX1Q92499 740 aaKnown RBP24.93■■□□□ 1.58
LINC00543-201ENST00000567234 ARHGEF26Q96DR7 871 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 MS4A14Q96JA4 679 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 TCHPQ9BT92 498 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 PI4K2AQ9BTU6 479 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.93■■□□□ 1.58
LINC00543-201ENST00000567234 EBAG9O00559 213 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 MTA2O94776 668 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 PPFIA1Q13136 1202 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 FOXR1Q6PIV2 292 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 FAM76AQ8TAV0 307 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 TRAPPC12Q8WVT3 735 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 MAML3Q96JK9 1138 aa24.93■■□□□ 1.58
LINC00543-201ENST00000567234 TTLL13PA6NNM8 815 aa24.92■■□□□ 1.58
LINC00543-201ENST00000567234 AOC2O75106 756 aa24.92■■□□□ 1.58
LINC00543-201ENST00000567234 MMEP08473 750 aa24.92■■□□□ 1.58
LINC00543-201ENST00000567234 TBXAS1P24557 533 aaPredicted RBP24.92■■□□□ 1.58
LINC00543-201ENST00000567234 LMBRD2Q68DH5 695 aaPredicted RBP24.92■■□□□ 1.58
LINC00543-201ENST00000567234 PTPRHQ9HD43 1115 aa24.92■■□□□ 1.58
LINC00543-201ENST00000567234 PCDHB2Q9Y5E7 798 aa24.92■■□□□ 1.58
LINC00543-201ENST00000567234 SLC15A5A6NIM6 579 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 ERLIN2O94905 339 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 INSRRP14616 1297 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 C11orf63Q6NUN7 778 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 MPZL3Q6UWV2 235 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 IFNLR1Q8IU57 520 aaPredicted RBP24.91■■□□□ 1.58
LINC00543-201ENST00000567234 USP38Q8NB14 1042 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 AFG1LQ8WV93 481 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 ABHD16BQ9H3Z7 469 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 GOLPH3Q9H4A6 298 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 RBM12Q9NTZ6 932 aaKnown RBP24.91■■□□□ 1.58
LINC00543-201ENST00000567234 SLC5A4Q9NY91 659 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 EHD2Q9NZN4 543 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 CPSF3Q9UKF6 684 aaKnown RBP24.91■■□□□ 1.58
LINC00543-201ENST00000567234 HOXD8P13378 290 aaPredicted RBP24.91■■□□□ 1.58
LINC00543-201ENST00000567234 KRT5P13647 590 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 ADCYAP1R1P41586 468 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 IRF5Q13568 498 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 FAM187BQ17R55 369 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 RASGEF1CQ8N431 466 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 METTL13Q8N6R0 699 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 LINC01465Q8N7H1 131 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 LRRC1Q9BTT6 524 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 RNF216Q9NWF9 866 aaPredicted RBP24.91■■□□□ 1.58
LINC00543-201ENST00000567234 SMARCAL1Q9NZC9 954 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 TMEM59LQ9UK28 342 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 KAT6AQ92794 2004 aa24.91■■□□□ 1.58
LINC00543-201ENST00000567234 GOLGA8KD6RF30 607 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 CLCN3P51790 818 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 INHBEP58166 350 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 CUL2Q13617 745 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 DUSP28Q4G0W2 176 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 GJC2Q5T442 439 aaPredicted RBP24.9■■□□□ 1.58
LINC00543-201ENST00000567234 IQSEC1Q6DN90 963 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 NLRP4Q96MN2 994 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 TINF2Q9BSI4 451 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 C16orf70Q9BSU1 422 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 PRMT7Q9NVM4 692 aaPredicted RBP24.9■■□□□ 1.58
LINC00543-201ENST00000567234 CNTN6Q9UQ52 1028 aa24.9■■□□□ 1.58
LINC00543-201ENST00000567234 PCNTO95613 3336 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 DOCK3Q8IZD9 2030 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 KIF1CO43896 1103 aaKnown RBP24.89■■□□□ 1.58
LINC00543-201ENST00000567234 HARSP12081 509 aaKnown RBP24.89■■□□□ 1.58
LINC00543-201ENST00000567234 PHKA2P46019 1235 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 DNA2P51530 1060 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 APLP1P51693 650 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 HTRA3P83110 453 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 MBTD1Q05BQ5 628 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 SREBF2Q12772 1141 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 ATF7IP2Q5U623 682 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 ACAD10Q6JQN1 1059 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 CCNI2Q6ZMN8 369 aaPredicted RBP24.89■■□□□ 1.58
LINC00543-201ENST00000567234 ZBTB33Q86T24 672 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 CTTNBP2NLQ9P2B4 639 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 GTF3C4Q9UKN8 822 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 TTC7AQ9ULT0 858 aaPredicted RBP24.89■■□□□ 1.58
LINC00543-201ENST00000567234 COG5Q9UP83 839 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 TNFSF13BQ9Y275 285 aa24.89■■□□□ 1.58
LINC00543-201ENST00000567234 ANK1P16157 1881 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 INO80B-WBP1J3KQ70 363 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 PHACTR2O75167 634 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 CYP1A2P05177 515 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 CLTAP09496 248 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 NCOA4Q13772 614 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 DEFB115Q30KQ5 88 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 C8orf74Q6P047 294 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 OR5B17Q8NGF7 314 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 IMPG2Q9BZV3 1241 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 INO80BQ9C086 356 aaPredicted RBP24.89■■□□□ 1.57
LINC00543-201ENST00000567234 ACP6Q9NPH0 428 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 CREBZFQ9NS37 354 aa24.89■■□□□ 1.57
LINC00543-201ENST00000567234 ACO1P21399 889 aaKnown RBP24.88■■□□□ 1.57
LINC00543-201ENST00000567234 TMOD1P28289 359 aa24.88■■□□□ 1.57
LINC00543-201ENST00000567234 TNFSF9P41273 254 aa24.88■■□□□ 1.57
LINC00543-201ENST00000567234 TM4SF4P48230 202 aa24.88■■□□□ 1.57
LINC00543-201ENST00000567234 POU5F1Q01860 360 aaKnown RBP24.88■■□□□ 1.57
LINC00543-201ENST00000567234 CRHR2Q13324 411 aa24.88■■□□□ 1.57
LINC00543-201ENST00000567234 CLEC16AQ2KHT3 1053 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms