RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 SLC8B1Q6J4K2 584 aa18.58■□□□□ 0.56
CDH3-205ENST00000566808 CSGALNACT1Q8TDX6 532 aa18.58■□□□□ 0.56
CDH3-205ENST00000566808 C8orf33Q9H7E9 229 aaPredicted RBP18.58■□□□□ 0.56
CDH3-205ENST00000566808 RBM12Q9NTZ6 932 aaKnown RBP18.58■□□□□ 0.56
CDH3-205ENST00000566808 RGL1Q9NZL6 768 aa18.58■□□□□ 0.56
CDH3-205ENST00000566808 PCDHGA5Q9Y5G8 931 aa18.58■□□□□ 0.56
CDH3-205ENST00000566808 NCANO14594 1321 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 TRAPPC3O43617 180 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 B3GAT3O94766 335 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 GCFC2P16383 781 aaKnown RBP18.57■□□□□ 0.56
CDH3-205ENST00000566808 TKTP29401 623 aaKnown RBP18.57■□□□□ 0.56
CDH3-205ENST00000566808 RAP1GAPP47736 663 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 CYP4A11Q02928 519 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 INF2Q27J81 1249 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 PLA2G2CQ5R387 149 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 CYP4A22Q5TCH4 519 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 CACNA2D4Q7Z3S7 1137 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 MFSD6LQ8IWD5 586 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 TCEAL8Q8IYN2 117 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 ELMOD1Q8N336 334 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 LEMD2Q8NC56 503 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 GAB3Q8WWW8 586 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 E2F7Q96AV8 911 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 DYDC2Q96IM9 177 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 PRMT7Q9NVM4 692 aaPredicted RBP18.57■□□□□ 0.56
CDH3-205ENST00000566808 INSL5Q9Y5Q6 135 aa18.57■□□□□ 0.56
CDH3-205ENST00000566808 KIF26AQ9ULI4 1882 aaPredicted RBP18.56■□□□□ 0.56
CDH3-205ENST00000566808 SLC38A8A6NNN8 435 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 SOBPA7XYQ1 873 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 N4BP3O15049 544 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 ZBTB39O15060 712 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 TBX3O15119 743 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 ABLIM3O94929 683 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 ATF2P15336 505 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 VIPR2P41587 438 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 CTTNQ14247 550 aaKnown RBP18.56■□□□□ 0.56
CDH3-205ENST00000566808 NCAPH2Q6IBW4 605 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 GALNT17Q6IS24 598 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 Q6ZUG5 572 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 KRT25Q7Z3Z0 450 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 TRIM22Q8IYM9 498 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 FAM177A1Q8N128 213 aaPredicted RBP18.56■□□□□ 0.56
CDH3-205ENST00000566808 ZSCAN18Q8TBC5 510 aaPredicted RBP18.56■□□□□ 0.56
CDH3-205ENST00000566808 ZSWIM3Q96MP5 696 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 CCDC43Q96MW1 224 aaKnown RBP18.56■□□□□ 0.56
CDH3-205ENST00000566808 UROC1Q96N76 676 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 PDZD7Q9H5P4 517 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 SNTG2Q9NY99 539 aa18.56■□□□□ 0.56
CDH3-205ENST00000566808 FLNBO75369 2602 aaKnown RBP18.55■□□□□ 0.56
CDH3-205ENST00000566808 RPP40O75818 363 aaKnown RBP18.55■□□□□ 0.56
CDH3-205ENST00000566808 NOVA1P51513 510 aaKnown RBP18.55■□□□□ 0.56
CDH3-205ENST00000566808 KPNA1P52294 538 aaPredicted RBP18.55■□□□□ 0.56
CDH3-205ENST00000566808 NPY5RQ15761 445 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 FAM187BQ17R55 369 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 WDR44Q5JSH3 913 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 RNF43Q68DV7 783 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 PPP4R3AQ6IN85 833 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 IQCEQ6IPM2 695 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 RALGPS2Q86X27 583 aaPredicted RBP18.55■□□□□ 0.56
CDH3-205ENST00000566808 YAF2Q8IY57 180 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 SYNPOQ8N3V7 929 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 FAM200AQ8TCP9 573 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 ADPGKQ9BRR6 497 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 TMEM121BQ9BXQ6 578 aaPredicted RBP18.55■□□□□ 0.56
CDH3-205ENST00000566808 ADAM33Q9BZ11 813 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 POLR3FQ9H1D9 316 aaPredicted RBP18.55■□□□□ 0.56
CDH3-205ENST00000566808 CYP4F11Q9HBI6 524 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 C2orf42Q9NWW7 574 aa18.55■□□□□ 0.56
CDH3-205ENST00000566808 CCDC163A0A0D9SF12 145 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 LRRIQ4A6NIV6 560 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 HEPACAM2A8MVW5 462 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 CHADO15335 359 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 AKAP3O75969 853 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 PRKCBP05771 671 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 CPA1P15085 419 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 CTHP32929 405 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 MPLP40238 635 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 CLCNKBP51801 687 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 EPHA5P54756 1037 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 ZNF252P-AS1Q0IIN9 211 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 CCINQ13939 588 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 CDCA2Q69YH5 1023 aaPredicted RBP18.54■□□□□ 0.56
CDH3-205ENST00000566808 KBTBD6Q86V97 674 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 TPH2Q8IWU9 490 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 FBXL16Q8N461 479 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 HAS1Q92839 578 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 CXCL16Q9H2A7 254 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 ASAH2Q9NR71 780 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 VPS45Q9NRW7 570 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 ANKEF1Q9NU02 776 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 WASF3Q9UPY6 502 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 FREM2Q5SZK8 3169 aa18.54■□□□□ 0.56
CDH3-205ENST00000566808 IGSF10Q6WRI0 2623 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 MYBPHLA2RUH7 354 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 SPECC1L-ADORA2AF8WAN1 911 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 MOSPD3O75425 235 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 LYPLA2O95372 231 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 SOX9P48436 509 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 FCHO2Q0JRZ9 810 aa18.53■□□□□ 0.56
CDH3-205ENST00000566808 FOXC1Q12948 553 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms