RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CFAP57Q96MR6 1250 aa22.98■■□□□ 1.27
SPSB3-208ENST00000566339 SMG5Q9UPR3 1016 aaKnown RBP22.98■■□□□ 1.27
SPSB3-208ENST00000566339 PCDHAC2Q9Y5I4 1007 aa22.98■■□□□ 1.27
SPSB3-208ENST00000566339 FAM47DPA6NHR8 397 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 GDF11O95390 407 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 UNGP13051 313 aaPredicted RBP22.97■■□□□ 1.27
SPSB3-208ENST00000566339 TAC1P20366 129 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 ABCD1P33897 745 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 KLF1Q13351 362 aaPredicted RBP22.97■■□□□ 1.27
SPSB3-208ENST00000566339 ACCSLQ4AC99 568 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 TRIM72Q6ZMU5 477 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 PARD3BQ8TEW8 1205 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 KAT5Q92993 513 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 DDX27Q96GQ7 796 aaKnown RBP22.97■■□□□ 1.27
SPSB3-208ENST00000566339 MFSD14AQ96MC6 490 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 LRMDAQ9H2I8 198 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 CTNNAL1Q9UBT7 734 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 ANAPC7Q9UJX3 599 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 NAALADL1Q9UQQ1 740 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 USH1CQ9Y6N9 552 aa22.97■■□□□ 1.27
SPSB3-208ENST00000566339 DCTN3O75935 186 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 ADCY8P40145 1251 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 CETN2P41208 172 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 QARSP47897 775 aaKnown RBP22.96■■□□□ 1.27
SPSB3-208ENST00000566339 CACNB3P54284 484 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 KYNUQ16719 465 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 DRICH1Q6PGQ1 229 aaPredicted RBP22.96■■□□□ 1.27
SPSB3-208ENST00000566339 ZNF365Q70YC5 407 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 MCOLN2Q8IZK6 566 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 ZCCHC9Q8N567 271 aaKnown RBP22.96■■□□□ 1.27
SPSB3-208ENST00000566339 ANKRD42Q8N9B4 389 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 MGARPQ8TDB4 240 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 VCPIP1Q96JH7 1222 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 TRIM6Q9C030 488 aaPredicted RBP22.96■■□□□ 1.27
SPSB3-208ENST00000566339 DBNDD1Q9H9R9 158 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 CHST7Q9NS84 486 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 ANKEF1Q9NU02 776 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 RAB20Q9NX57 234 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 BCS1LQ9Y276 419 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 A0A1W2PRG0 241 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 ATMINO43313 823 aaPredicted RBP22.96■■□□□ 1.27
SPSB3-208ENST00000566339 KRT16P08779 473 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 CHRNA5P30532 468 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 HSD17B4P51659 736 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 NAA25Q14CX7 972 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 SNRNP35Q16560 246 aaKnown RBP22.96■■□□□ 1.27
SPSB3-208ENST00000566339 ANKS1BQ7Z6G8 1248 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 MAP4K3Q8IVH8 894 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 APLFQ8IW19 511 aaPredicted RBP22.96■■□□□ 1.27
SPSB3-208ENST00000566339 C4orf19Q8IY42 314 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 KATNAL2Q8IYT4 538 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 TEX9Q8N6V9 391 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 MAML1Q92585 1016 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 PITPNM3Q9BZ71 974 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 PHACTR1Q9C0D0 580 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 C17orf75Q9HAS0 396 aa22.96■■□□□ 1.27
SPSB3-208ENST00000566339 MAP3K20Q9NYL2 800 aaKnown RBP22.96■■□□□ 1.27
SPSB3-208ENST00000566339 PROSCO94903 275 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 ATP2A2P16615 1042 aaKnown RBP22.95■■□□□ 1.26
SPSB3-208ENST00000566339 SCP2P22307 547 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 ALDH3A1P30838 453 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 RASSF2P50749 326 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 POLGP54098 1239 aaPredicted RBP22.95■■□□□ 1.26
SPSB3-208ENST00000566339 ZKSCAN8Q15776 578 aaPredicted RBP22.95■■□□□ 1.26
SPSB3-208ENST00000566339 CHADLQ6NUI6 762 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 KIAA0825Q8IV33 1275 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 RHOT1Q8IXI2 618 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 ZNF398Q8TD17 642 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 SSU72Q9NP77 194 aaKnown RBP22.95■■□□□ 1.26
SPSB3-208ENST00000566339 TBC1D22BQ9NU19 505 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 SLC5A4Q9NY91 659 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 ZHX2Q9Y6X8 837 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 NFASCO94856 1347 aa22.95■■□□□ 1.26
SPSB3-208ENST00000566339 SMCHD1A6NHR9 2005 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 ADRB2P07550 413 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 KCNA3P22001 575 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 MPP2Q14168 576 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 SPARCL1Q14515 664 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 CGB2Q6NT52 195 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 OTUD6AQ7L8S5 288 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 EXD1Q8NHP7 514 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.94■■□□□ 1.26
SPSB3-208ENST00000566339 SEMA4DQ92854 862 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 BTBD6Q96KE9 485 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 FETUBQ9UGM5 382 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 ASMTLO95671 621 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 KCTD19Q17RG1 926 aaPredicted RBP22.94■■□□□ 1.26
SPSB3-208ENST00000566339 LIN9Q5TKA1 542 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 SPIRE2Q8WWL2 714 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 POP1Q99575 1024 aaKnown RBP22.94■■□□□ 1.26
SPSB3-208ENST00000566339 MRPL47Q9HD33 250 aaKnown RBP22.94■■□□□ 1.26
SPSB3-208ENST00000566339 FEM1BQ9UK73 627 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 PCDHB2Q9Y5E7 798 aa22.94■■□□□ 1.26
SPSB3-208ENST00000566339 TRAFD1O14545 582 aaPredicted RBP22.93■■□□□ 1.26
SPSB3-208ENST00000566339 ABLIM1O14639 778 aa22.93■■□□□ 1.26
SPSB3-208ENST00000566339 DHX15O43143 795 aaKnown RBP22.93■■□□□ 1.26
SPSB3-208ENST00000566339 ECE2O60344 883 aa22.93■■□□□ 1.26
SPSB3-208ENST00000566339 RPSAP08865 295 aaKnown RBP22.93■■□□□ 1.26
SPSB3-208ENST00000566339 CREB1P16220 341 aa22.93■■□□□ 1.26
SPSB3-208ENST00000566339 ZC3H12AQ5D1E8 599 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms