RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 Q6ZVL8 140 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 C16orf86Q6ZW13 317 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 NIM1KQ8IY84 436 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 FITM2Q8N6M3 262 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 CASKIN2Q8WXE0 1202 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 CYFIP2Q96F07 1278 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 MARS2Q96GW9 593 aaKnown RBP3.35□□□□□ -1.87
SMG1-212ENST00000566328 FBXL20Q96IG2 436 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 KANSL2Q9H9L4 492 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 RBM12Q9NTZ6 932 aaKnown RBP3.35□□□□□ -1.87
SMG1-212ENST00000566328 SIK3Q9Y2K2 1263 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 WNT6Q9Y6F9 365 aa3.35□□□□□ -1.87
SMG1-212ENST00000566328 WIPF3A6NGB9 483 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 MANSC4A6NHS7 340 aaPredicted RBP3.34□□□□□ -1.87
SMG1-212ENST00000566328 GSG1L2A8MUP6 293 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 KCNAB3O43448 404 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 ENDOD1O94919 500 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 SRGNP10124 158 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 SLC6A2P23975 617 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 PTGER1P34995 402 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 ALDH1A3P47895 512 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 SESN3P58005 492 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 EXOSC10Q01780 885 aaKnown RBP3.34□□□□□ -1.87
SMG1-212ENST00000566328 LLGL1Q15334 1064 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 SF3B3Q15393 1217 aaKnown RBP3.34□□□□□ -1.87
SMG1-212ENST00000566328 SEPT7Q16181 437 aaKnown RBP3.34□□□□□ -1.87
SMG1-212ENST00000566328 ATP2B3Q16720 1220 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 C21orf62-AS1Q17RA5 79 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 GEN1Q17RS7 908 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 MUM1L1Q5H9M0 696 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 TSTD2Q5T7W7 516 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 VWA1Q6PCB0 445 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 SEM1Q6ZVN7 128 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 PDPRQ8NCN5 879 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 FBXO18Q8NFZ0 1043 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 STON2Q8WXE9 905 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 AUTS2Q8WXX7 1259 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 TARS2Q9BW92 718 aaKnown RBP3.34□□□□□ -1.87
SMG1-212ENST00000566328 GREM2Q9H772 168 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 ZSWIM4Q9H7M6 989 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 INTS13Q9NVM9 706 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 FLRT1Q9NZU1 646 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 ZNF804BA4D1E1 1349 aa3.34□□□□□ -1.87
SMG1-212ENST00000566328 PROM1O43490 865 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 ULK1O75385 1050 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 PRSS23O95084 383 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 MAPK10P53779 464 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 SLC10A2Q12908 348 aaPredicted RBP3.33□□□□□ -1.88
SMG1-212ENST00000566328 PDCD1Q15116 288 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 ADRM1Q16186 407 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 ANO4Q32M45 955 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 FAM153CQ494X1 144 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 UBE3BQ7Z3V4 1068 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 PEG10Q86TG7 708 aaKnown RBP3.33□□□□□ -1.88
SMG1-212ENST00000566328 NLGN4YQ8NFZ3 816 aaPredicted RBP3.33□□□□□ -1.88
SMG1-212ENST00000566328 DDB2Q92466 427 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 APPBP2Q92624 585 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 DPF1Q92782 380 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 PGBD1Q96JS3 809 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 FCRL4Q96PJ5 515 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 FBXO34Q9NWN3 711 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 AJAP1Q9UKB5 411 aaPredicted RBP3.33□□□□□ -1.88
SMG1-212ENST00000566328 EDARQ9UNE0 448 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 PLAAQ9Y263 795 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 NEU2Q9Y3R4 380 aa3.33□□□□□ -1.88
SMG1-212ENST00000566328 A0A1W2PS29 197 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 CCDC78A2IDD5 438 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 GCOM1H8Y6P7 765 aaPredicted RBP3.32□□□□□ -1.88
SMG1-212ENST00000566328 ITPKBP27987 946 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 RPS7P62081 194 aaKnown RBP3.32□□□□□ -1.88
SMG1-212ENST00000566328 CREMQ03060 361 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 EIF2B5Q13144 721 aaKnown RBP3.32□□□□□ -1.88
SMG1-212ENST00000566328 GRM1Q13255 1194 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 PTPRRQ15256 657 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 MTX3Q5HYI7 312 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 CLNKQ7Z7G1 428 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 DHX37Q8IY37 1157 aaKnown RBP3.32□□□□□ -1.88
SMG1-212ENST00000566328 SEMA6DQ8NFY4 1073 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 TFAP2BQ92481 460 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 USP7Q93009 1102 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 ZBTB9Q96C00 473 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 HAPLN3Q96S86 360 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 ADI1Q9BV57 179 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 ACE2Q9BYF1 805 aaPredicted RBP3.32□□□□□ -1.88
SMG1-212ENST00000566328 SEMA4CQ9C0C4 833 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 GSTO2Q9H4Y5 243 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 IFT122Q9HBG6 1241 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 TOPORSQ9NS56 1045 aaPredicted RBP3.32□□□□□ -1.88
SMG1-212ENST00000566328 SLC23A1Q9UHI7 598 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 SCOCQ9UIL1 159 aa3.32□□□□□ -1.88
SMG1-212ENST00000566328 AOX1Q06278 1338 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 PRAMEF33A0A0G2JMD5 474 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 ZEB2O60315 1214 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 PRAMEF10O60809 474 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 IGKV2-30P06310 120 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 TUBA4AP68366 448 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 NOMO3P69849 1222 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 CCT2P78371 535 aaKnown RBP3.31□□□□□ -1.88
SMG1-212ENST00000566328 FPGSQ05932 587 aa3.31□□□□□ -1.88
SMG1-212ENST00000566328 NOMO1Q15155 1222 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms