RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 PORP16435 677 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 HOXD11P31277 338 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 ADARP55265 1226 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 CDC16Q13042 620 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 KPNB1Q14974 876 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 TCEAL1Q15170 157 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SULF1Q8IWU6 871 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 MYOCDQ8IZQ8 938 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TGS1Q96RS0 853 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 PPP1R16BQ96T49 567 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 NOC4LQ9BVI4 516 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 SLC2A11Q9BYW1 496 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SEMA4AQ9H3S1 761 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 KLHL14Q9P2G3 628 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CCDC163A0A0D9SF12 145 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ALG1L2C9J202 215 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 EYA2O00167 538 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PFDN6O15212 129 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 BUB1O43683 1085 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 IVDP26440 423 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ANXA13P27216 316 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PPARGP37231 505 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 CYLC2Q14093 348 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 HIF1AQ16665 826 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 HMBOX1Q6NT76 420 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CSGALNACT2Q8N6G5 542 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ANKRD42Q8N9B4 389 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 HDAC11Q96DB2 347 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PAWRQ96IZ0 340 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 ZNF184Q99676 751 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 CUEDC2Q9H467 287 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SSU72Q9NP77 194 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 PIH1D3Q9NQM4 214 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 CARD8Q9Y2G2 431 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ACTL7BQ9Y614 415 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TRIM43BA6NCK2 446 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 MTIF2P46199 727 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 KCNMA1Q12791 1236 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 METTL24Q5JXM2 366 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 UGT2A3Q6UWM9 527 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TOM1L2Q6ZVM7 507 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 C12orf50Q8NA57 414 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 CHAC2Q8WUX2 184 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 OSCP1Q8WVF1 389 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CENPKQ9BS16 269 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 AP1M1Q9BXS5 423 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SYNCQ9H7C4 482 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 NKIRAS1Q9NYS0 192 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 KIF17Q9P2E2 1029 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ANGPTL3Q9Y5C1 460 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PCDHGA3Q9Y5H0 932 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SNX9Q9Y5X1 595 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 C2CD2LO14523 706 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 FUCA1P04066 466 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CHRNA3P32297 505 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 IGHMBP2P38935 993 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 PTENP60484 403 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 POU5F1BQ06416 359 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CAPN12Q6ZSI9 719 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 GLYCTKQ8IVS8 523 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 UHMK1Q8TAS1 419 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 IGDCC4Q8TDY8 1250 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PPP1R2P1Q96PQ5 205 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ERP44Q9BS26 406 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TUBGCP2Q9BSJ2 902 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 KIAA1683Q9H0B3 1180 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 LGR6Q9HBX8 967 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 EVA1BQ9NVM1 165 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 HAO1Q9UJM8 370 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ADAMTS13Q76LX8 1427 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 GOLGA8IPA6NC78 632 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SOBPA7XYQ1 873 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 KRIT1O00522 736 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 MAGEC1O60732 1142 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TBX10O75333 385 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 H2AFZP0C0S5 128 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 S100A1P23297 94 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ARFIP2P53365 341 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PDE4DQ08499 809 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PPIDQ08752 370 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 VWA3BQ502W6 1294 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 H2AFVQ71UI9 128 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PTF1AQ7RTS3 328 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SLFN11Q7Z7L1 901 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SAPCD2Q86UD0 394 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TEX19Q8NA77 164 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TSNARE1Q96NA8 513 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 BTBD9Q96Q07 612 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CELF4Q9BZC1 486 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 GANQ9H2C0 597 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TUFT1Q9NNX1 390 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 MTUS1Q9ULD2 1270 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SSX2IPQ9Y2D8 614 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 DIS3Q9Y2L1 958 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 NR2E1Q9Y466 385 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TMEM120BA0PK00 339 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TCP11X1B4DZS4 312 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TTLL1O95922 423 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 FGAP02671 866 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 PTPN2P17706 415 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms