RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 CCDC43Q96MW1 224 aaKnown RBP14.06□□□□□ -0.16
RNF40-208ENST00000565995 TRPV4Q9HBA0 871 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 ZFP14Q9HCL3 533 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 ZNF334Q9HCZ1 680 aaPredicted RBP14.06□□□□□ -0.16
RNF40-208ENST00000565995 TUFT1Q9NNX1 390 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 GMEB2Q9UKD1 530 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 NUP205Q92621 2012 aa14.06□□□□□ -0.16
RNF40-208ENST00000565995 TCHHQ07283 1943 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 A0A087WWV3 80 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 DCDC2BA2VCK2 349 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 ZNF197O14709 1029 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 SLC30A4O14863 429 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 USO1O60763 962 aaKnown RBP14.05□□□□□ -0.16
RNF40-208ENST00000565995 B3GAT3O94766 335 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 CTDNEP1O95476 244 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 RETP07949 1114 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 FDPSP14324 419 aaKnown RBP14.05□□□□□ -0.16
RNF40-208ENST00000565995 CEBPBP17676 345 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 ATP2B1P20020 1258 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 TKTP29401 623 aaKnown RBP14.05□□□□□ -0.16
RNF40-208ENST00000565995 KRT2P35908 639 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 TXKP42681 527 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 CCR3P51677 355 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 ROR1Q01973 937 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 DCAF4L1Q3SXM0 396 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 FAM78AQ5JUQ0 283 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 EEF1DP3Q658K8 133 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 CATSPER3Q86XQ3 398 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 C3orf58Q8NDZ4 430 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 NETO1Q8TDF5 533 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 BSNDQ8WZ55 320 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 WASF1Q92558 559 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 ASB16Q96NS5 453 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 NACC1Q96RE7 527 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 POLR3CQ9BUI4 534 aaPredicted RBP14.05□□□□□ -0.16
RNF40-208ENST00000565995 TRMT61BQ9BVS5 477 aaKnown RBP14.05□□□□□ -0.16
RNF40-208ENST00000565995 PDRG1Q9NUG6 133 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 MAFFQ9ULX9 164 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 USP18Q9UMW8 372 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 KIAA1549LQ6ZVL6 1849 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 SDK1Q7Z5N4 2213 aa14.05□□□□□ -0.16
RNF40-208ENST00000565995 WDR27A2RRH5 827 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 PAPSS2O95340 614 aaPredicted RBP14.04□□□□□ -0.16
RNF40-208ENST00000565995 LRG1P02750 347 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 PRKCBP05771 671 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 PSMC3P17980 439 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 CYP11B2P19099 503 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 CNR2P34972 360 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 NAMPTP43490 491 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 EFNA5P52803 228 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 EPHA5P54756 1037 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 TPGS2Q68CL5 300 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 BRD9Q9H8M2 597 aa14.04□□□□□ -0.16
RNF40-208ENST00000565995 SMIM28A0A1B0GU29 152 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 ARNTLO00327 626 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 WNT7AO00755 349 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 NRG2O14511 850 aaPredicted RBP14.03□□□□□ -0.16
RNF40-208ENST00000565995 SYN3O14994 580 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 NEMFO60524 1076 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 FOXD2O60548 495 aaPredicted RBP14.03□□□□□ -0.16
RNF40-208ENST00000565995 MOSPD3O75425 235 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 MED24O75448 989 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 CHRNB1P11230 501 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 MUTP22033 750 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 RPA1P27694 616 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 CCR2P41597 374 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 SPEM2Q0P670 501 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 PPP2R5AQ15172 486 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 CSRP2Q16527 193 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 NT5DC1Q5TFE4 455 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 VITQ6UXI7 678 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 MAEAQ7L5Y9 396 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 MFSD6LQ8IWD5 586 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 DEPDC1BQ8WUY9 529 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 FAM3CQ92520 227 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 SMARCD2Q92925 531 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 TCEAL4Q96EI5 215 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 LMAN1LQ9HAT1 526 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 ORC3Q9UBD5 711 aaPredicted RBP14.03□□□□□ -0.16
RNF40-208ENST00000565995 RAB23Q9ULC3 237 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 TPCN1Q9ULQ1 816 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 GDAQ9Y2T3 454 aa14.03□□□□□ -0.16
RNF40-208ENST00000565995 FRYQ5TBA9 3013 aa14.02□□□□□ -0.16
RNF40-208ENST00000565995 SEC24AO95486 1093 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 ELF1P32519 619 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 BRCC3P46736 316 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 CXCL12P48061 93 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 SOX4Q06945 474 aaPredicted RBP14.02□□□□□ -0.17
RNF40-208ENST00000565995 C1orf228Q6PIY5 440 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 PADI6Q6TGC4 694 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 LEMD2Q8NC56 503 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 MSANTD3Q96H12 275 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 ZSWIM3Q96MP5 696 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 CORO1BQ9BR76 489 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 GPR88Q9GZN0 384 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 BRMS1Q9HCU9 246 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 PTPRHQ9HD43 1115 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 NDRG2Q9UN36 371 aaKnown RBP14.02□□□□□ -0.17
RNF40-208ENST00000565995 TNFSF13BQ9Y275 285 aa14.02□□□□□ -0.17
RNF40-208ENST00000565995 USP20Q9Y2K6 914 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms