RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 POLIQ9UNA4 740 aa25.96■■□□□ 1.75
RAB40C-209ENST00000565511 TBC1D4O60343 1298 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 PLCG1P19174 1290 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 TNFSF9P41273 254 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 NUBP1P53384 320 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 STRN3Q13033 797 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 DHX8Q14562 1220 aaKnown RBP25.95■■□□□ 1.74
RAB40C-209ENST00000565511 MCM6Q14566 821 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 KARSQ15046 597 aaKnown RBP25.95■■□□□ 1.74
RAB40C-209ENST00000565511 ZPBP2Q6X784 338 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 ANKS3Q6ZW76 656 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 GPR152Q8TDT2 470 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 SLC38A7Q9NVC3 462 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 CDH7Q9ULB5 785 aa25.95■■□□□ 1.74
RAB40C-209ENST00000565511 ANK1P16157 1881 aa25.94■■□□□ 1.74
RAB40C-209ENST00000565511 WDR27A2RRH5 827 aa25.94■■□□□ 1.74
RAB40C-209ENST00000565511 FAM189A1O60320 539 aa25.94■■□□□ 1.74
RAB40C-209ENST00000565511 SRFP11831 508 aa25.94■■□□□ 1.74
RAB40C-209ENST00000565511 CUL4AQ13619 759 aa25.94■■□□□ 1.74
RAB40C-209ENST00000565511 SF3A1Q15459 793 aaKnown RBP25.94■■□□□ 1.74
RAB40C-209ENST00000565511 SLC8B1Q6J4K2 584 aa25.94■■□□□ 1.74
RAB40C-209ENST00000565511 KCTD17Q8N5Z5 321 aa25.94■■□□□ 1.74
RAB40C-209ENST00000565511 FGF13Q92913 245 aa25.94■■□□□ 1.74
RAB40C-209ENST00000565511 KCND2Q9NZV8 630 aa25.94■■□□□ 1.74
RAB40C-209ENST00000565511 DAXXQ9UER7 740 aaPredicted RBP25.94■■□□□ 1.74
RAB40C-209ENST00000565511 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.94■■□□□ 1.74
RAB40C-209ENST00000565511 NRG2O14511 850 aaPredicted RBP25.93■■□□□ 1.74
RAB40C-209ENST00000565511 TRAPPC3O43617 180 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 POU2F2P09086 479 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 GUCY2FP51841 1108 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 SMTNP53814 917 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 MRPL58Q14197 206 aaKnown RBP25.93■■□□□ 1.74
RAB40C-209ENST00000565511 SLC5A9Q2M3M2 681 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 USP49Q70CQ1 688 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 HAUS6Q7Z4H7 955 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 ING5Q8WYH8 240 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 AK8Q96MA6 479 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 FIZ1Q96SL8 496 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 WNT16Q9UBV4 365 aa25.93■■□□□ 1.74
RAB40C-209ENST00000565511 XYLBO75191 536 aa25.92■■□□□ 1.74
RAB40C-209ENST00000565511 SEC24AO95486 1093 aa25.92■■□□□ 1.74
RAB40C-209ENST00000565511 SLC39A4Q6P5W5 647 aa25.92■■□□□ 1.74
RAB40C-209ENST00000565511 NPAS3Q8IXF0 933 aa25.92■■□□□ 1.74
RAB40C-209ENST00000565511 RAD54LQ92698 747 aa25.92■■□□□ 1.74
RAB40C-209ENST00000565511 KCNN1Q92952 543 aa25.92■■□□□ 1.74
RAB40C-209ENST00000565511 NXPE3Q969Y0 559 aa25.92■■□□□ 1.74
RAB40C-209ENST00000565511 SUSD3Q96L08 255 aa25.92■■□□□ 1.74
RAB40C-209ENST00000565511 TTC26A0AVF1 554 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 CLDN3O15551 220 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 ABLIM3O94929 683 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 RPL9P32969 192 aaKnown RBP25.91■■□□□ 1.74
RAB40C-209ENST00000565511 UBA7P41226 1012 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 ZNF131P52739 623 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 ARPP19P56211 112 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 UVSSAQ2YD98 709 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 BRAPQ7Z569 592 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 CCDC105Q8IYK2 499 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 TBC1D17Q9HA65 648 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 FBXL5Q9UKA1 691 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 ODF2LQ9ULJ1 636 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 CLIC4Q9Y696 253 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 VPS13AQ96RL7 3174 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 TSC2P49815 1807 aa25.91■■□□□ 1.74
RAB40C-209ENST00000565511 VPS37CA5D8V6 355 aaPredicted RBP25.9■■□□□ 1.74
RAB40C-209ENST00000565511 K7ENM7 598 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 SYN3O14994 580 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 SLC26A4O43511 780 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 PTPAQ15257 358 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 PABPC1LQ4VXU2 614 aaKnown RBP25.9■■□□□ 1.74
RAB40C-209ENST00000565511 SPECC1Q5M775 1068 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 FAM173BQ6P4H8 233 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 BICD1Q96G01 975 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 CALML4Q96GE6 196 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 SLC2A4RGQ9NR83 387 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 LARSQ9P2J5 1176 aaKnown RBP25.9■■□□□ 1.74
RAB40C-209ENST00000565511 TBX20Q9UMR3 447 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 NUB1Q9Y5A7 615 aa25.9■■□□□ 1.74
RAB40C-209ENST00000565511 ARHGEF37A1IGU5 675 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 TISP43B9A030 160 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 PPEF2O14830 753 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 GFRA3O60609 400 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 RHOP08100 348 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 MCM4P33991 863 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 LONP1P36776 959 aaKnown RBP25.89■■□□□ 1.74
RAB40C-209ENST00000565511 MATR3P43243 847 aaKnown RBP eCLIP25.89■■□□□ 1.74
RAB40C-209ENST00000565511 GPC5P78333 572 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 ZBTB6Q15916 424 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 ENOX2Q16206 610 aaKnown RBP25.89■■□□□ 1.74
RAB40C-209ENST00000565511 MYCT1Q8N699 235 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 DTWD2Q8NBA8 298 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 ZNF461Q8TAF7 563 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 DDX12PQ92771 950 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 EPSTI1Q96J88 318 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 KXD1Q9BQD3 176 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 IKZF4Q9H2S9 585 aa25.89■■□□□ 1.74
RAB40C-209ENST00000565511 ZFP37Q9Y6Q3 630 aaPredicted RBP25.89■■□□□ 1.74
RAB40C-209ENST00000565511 RIF1Q5UIP0 2472 aaKnown RBP25.89■■□□□ 1.73
RAB40C-209ENST00000565511 LACTBL1A8MY62 500 aa25.88■■□□□ 1.73
RAB40C-209ENST00000565511 FAM13AO94988 1023 aa25.88■■□□□ 1.73
RAB40C-209ENST00000565511 PIGRP01833 764 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms