RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ADAM32Q8TC27 787 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 CCDC12Q8WUD4 166 aaPredicted RBP10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 LENG9Q96B70 501 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 CEP170P1Q96L14 293 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 NXF3Q9H4D5 531 aaKnown RBP10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 SLITRK6Q9H5Y7 841 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 CYP4F11Q9HBI6 524 aa10.03□□□□□ -0.8
VPS9D1-205ENST00000565452 ZMYM2Q9UBW7 1377 aa10.02□□□□□ -0.8
VPS9D1-205ENST00000565452 IGSF10Q6WRI0 2623 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 PSMD10O75832 226 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 MYL4P12829 197 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 ATF2P15336 505 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 GBP1P32455 592 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 CCR2P41597 374 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 NPEPPSP55786 919 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 PTENP60484 403 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 IRX4P78413 519 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 POU5F1BQ06416 359 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 SCAPQ12770 1279 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 GRSF1Q12849 480 aaKnown RBP eCLIP10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 TFDP1Q14186 410 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 ARHGAP29Q52LW3 1261 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 WDR44Q5JSH3 913 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 SLC27A1Q6PCB7 646 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 OTUD6AQ7L8S5 288 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 FERMT3Q86UX7 667 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 CHCHD4Q8N4Q1 142 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 TTC8Q8TAM2 541 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 BICD2Q8TD16 824 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 LRIG1Q96JA1 1093 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 BBC3Q96PG8 261 aaPredicted RBP10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 TMEM209Q96SK2 561 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 ZMYND12Q9H0C1 365 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 IL25Q9H293 177 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 CCDC86Q9H6F5 360 aaKnown RBP10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 DHX33Q9H6R0 707 aaKnown RBP10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 ASAH2Q9NR71 780 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 CACNA2D2Q9NY47 1150 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 CACNG4Q9UBN1 327 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 MYH9P35579 1960 aaKnown RBP10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 BPTFQ12830 3046 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 ASXL3Q9C0F0 2248 aa10.02□□□□□ -0.81
VPS9D1-205ENST00000565452 A0A1B0GUA9 196 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 SPAARA0A1B0GVQ0 90 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 DCLK1O15075 740 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 MEFVO15553 781 aaPredicted RBP10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 B3GAT3O94766 335 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 NPTXRO95502 500 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 ARF4P18085 180 aaPredicted RBP10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 CHMLP26374 656 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 QARSP47897 775 aaKnown RBP10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 FUT2Q10981 343 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 ZNF423Q2M1K9 1284 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 PLA2G4FQ68DD2 849 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 SGMS1Q86VZ5 419 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 HS6ST3Q8IZP7 471 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 NUSAP1Q9BXS6 441 aaKnown RBP10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 THG1LQ9NWX6 298 aaKnown RBP10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 GTSE1Q9NYZ3 720 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 EBF1Q9UH73 591 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 TPCN1Q9ULQ1 816 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 MAFFQ9ULX9 164 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 CNTNAP5Q8WYK1 1306 aa10.01□□□□□ -0.81
VPS9D1-205ENST00000565452 NAV2Q8IVL1 2488 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 ESYT2A0FGR8 921 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 UPK3BL1B0FP48 263 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 UPK3BL2E5RIL1 263 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 H7C4K7 107 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 TK2O00142 265 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 MOSPD3O75425 235 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 ARPP19P56211 112 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 AMPD2Q01433 879 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 ROR1Q01973 937 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 HNRNPDQ14103 355 aaKnown RBP10□□□□□ -0.81
VPS9D1-205ENST00000565452 TEAD2Q15562 447 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 RTN1Q16799 776 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 PFKFB3Q16875 520 aaPredicted RBP10□□□□□ -0.81
VPS9D1-205ENST00000565452 ITPRIPL2Q3MIP1 535 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 USP39Q53GS9 565 aaKnown RBP10□□□□□ -0.81
VPS9D1-205ENST00000565452 TPGS2Q68CL5 300 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 SLC8B1Q6J4K2 584 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 CYP2U1Q7Z449 544 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 IFNLR1Q8IU57 520 aaPredicted RBP10□□□□□ -0.81
VPS9D1-205ENST00000565452 ARID3BQ8IVW6 561 aaPredicted RBP10□□□□□ -0.81
VPS9D1-205ENST00000565452 ZNF579Q8NAF0 562 aaKnown RBP10□□□□□ -0.81
VPS9D1-205ENST00000565452 GJA10Q969M2 543 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 EXOC4Q96A65 974 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 SCUBE2Q9NQ36 999 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 LAMA1P25391 3075 aa10□□□□□ -0.81
VPS9D1-205ENST00000565452 TMEM189-UBE2V1I3L0A0 370 aa9.99□□□□□ -0.81
VPS9D1-205ENST00000565452 ZBTB43O43298 467 aa9.99□□□□□ -0.81
VPS9D1-205ENST00000565452 CDC45O75419 566 aa9.99□□□□□ -0.81
VPS9D1-205ENST00000565452 SEC24AO95486 1093 aa9.99□□□□□ -0.81
VPS9D1-205ENST00000565452 APBB3O95704 486 aa9.99□□□□□ -0.81
VPS9D1-205ENST00000565452 GJA1P17302 382 aa9.99□□□□□ -0.81
VPS9D1-205ENST00000565452 TKTP29401 623 aaKnown RBP9.99□□□□□ -0.81
VPS9D1-205ENST00000565452 EPHA5P54756 1037 aa9.99□□□□□ -0.81
VPS9D1-205ENST00000565452 AMHR2Q16671 573 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms