RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TMEM189-UBE2V1I3L0A0 370 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 TRAPPC3O43617 180 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 CLTAP09496 248 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 KCNE1P15382 129 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 GBP2P32456 591 aaPredicted RBP14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 MCM4P33991 863 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 OR1D2P34982 312 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 ARPP19P56211 112 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 ZXDAP98168 799 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 PPP2R3AQ06190 1150 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 SLC39A4Q6P5W5 647 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 EDAQ92838 391 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 DDX27Q96GQ7 796 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 FIZ1Q96SL8 496 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 MRPL44Q9H9J2 332 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 RPF1Q9H9Y2 349 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 LIMD1Q9UGP4 676 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 DPP7Q9UHL4 492 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 POLIQ9UNA4 740 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 TECTAO75443 2155 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 CFAP54Q96N23 3096 aa14.85□□□□□ -0.03
VPS9D1-204ENST00000565023 USP34Q70CQ2 3546 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 OGTO15294 1046 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 CUTAO60888 179 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 GCNT3O95395 438 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 FGFR3P22607 806 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 ACOT2P49753 483 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 KRT85P78386 507 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 GTF2BQ00403 316 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 PTPN21Q16825 1174 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 AXDND1Q5T1B0 1012 aaPredicted RBP14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 LIN9Q5TKA1 542 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 ADALQ6DHV7 355 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 LILRA6Q6PI73 481 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 MAP4K3Q8IVH8 894 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 NOC3LQ8WTT2 800 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 DHX58Q96C10 678 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 DNAJC19Q96DA6 116 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 SMOC2Q9H3U7 446 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 PLEKHA4Q9H4M7 779 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 CDY1Q9Y6F8 540 aa14.84□□□□□ -0.03
VPS9D1-204ENST00000565023 TMEM221A6NGB7 291 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 M0R296 226 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 CCL16O15467 120 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 PIGRP01833 764 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 C8AP07357 584 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 ENOX2Q16206 610 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 PPM1LQ5SGD2 360 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 VARS2Q5ST30 1063 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 PDXDC1Q6P996 788 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 RSPO2Q6UXX9 243 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 C15orf39Q6ZRI6 1047 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 TRIM67Q6ZTA4 783 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 HFE2Q6ZVN8 426 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 GET4Q7L5D6 327 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 ZNF720Q7Z2F6 126 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 GPR65Q8IYL9 337 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 ST13P5Q8NFI4 369 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 LEO1Q8WVC0 666 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 ZNF707Q96C28 371 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 ACSF2Q96CM8 615 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 CHAMP1Q96JM3 812 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 PANK4Q9NVE7 773 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 MTRRQ9UBK8 725 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 FBXW11Q9UKB1 542 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 PCDHA7Q9UN72 937 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 CLUHO75153 1309 aa14.83□□□□□ -0.04
VPS9D1-204ENST00000565023 TCHHQ07283 1943 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 A0A0B4J269 797 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 TTC26A0AVF1 554 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 ZMYND10O75800 440 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 GAP43P17677 238 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 RPL9P32969 192 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 ME1P48163 572 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 NTHL1P78549 312 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 KCNA1Q09470 495 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 JADE1Q6IE81 842 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 SHC4Q6S5L8 630 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 ANKS3Q6ZW76 656 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 OTOP3Q7RTS5 596 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 CMASQ8NFW8 434 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 SLC7A14Q8TBB6 771 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 HDAC7Q8WUI4 952 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 POMGNT1Q8WZA1 660 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 FGFBP2Q9BYJ0 223 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 PRKD2Q9BZL6 878 aa14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 CIZ1Q9ULV3 898 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 UBQLN1Q9UMX0 589 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 TIMM13Q9Y5L4 95 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-204ENST00000565023 DOCK8Q8NF50 2099 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 PPEF2O14830 753 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 NFICP08651 508 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 CASP5P51878 434 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 KYAT1Q16773 422 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 GRASPQ7Z6J2 395 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 SYCP3Q8IZU3 236 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 PLCD3Q8N3E9 789 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 HPS3Q969F9 1004 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 PBXIP1Q96AQ6 731 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms