RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 BICD1Q96G01 975 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 TUBGCP5Q96RT8 1024 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
LINC00554-201ENST00000564841 KRT82Q9NSB4 513 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 DLEC1Q9Y238 1755 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 IGKV6D-41A0A0C4DH26 115 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 CLDN3O15551 220 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 TTC4O95801 387 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 SKIP12755 728 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 POLD1P28340 1107 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 STRN3Q13033 797 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 TBC1D10BQ4KMP7 808 aaPredicted RBP17.31■□□□□ 0.36
LINC00554-201ENST00000564841 RUNDC3BQ96NL0 473 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 NINJ2Q9NZG7 142 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 SERPINA10Q9UK55 444 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 LTBP1Q14766 1721 aa17.31■□□□□ 0.36
LINC00554-201ENST00000564841 CFAP69A5D8W1 941 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 CREB3O43889 395 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 ECEL1O95672 775 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 ALAS1P13196 640 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 TNFAIP3P21580 790 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 YY1P25490 414 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 CDR2Q01850 454 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 WDR72Q3MJ13 1102 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 ISLR2Q6UXK2 745 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 CROCCP2Q86T23 111 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 SFR1Q86XK3 245 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 ACER1Q8TDN7 264 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 INPP5DQ92835 1189 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 P2RX7Q99572 595 aaKnown RBP17.3■□□□□ 0.36
LINC00554-201ENST00000564841 ETNK2Q9NVF9 386 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 LRRC37AA6NMS7 1700 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 PNMA6FA0A0J9YX94 578 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 C2orf71A6NGG8 1288 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 CHMP2AO43633 222 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 SOX5P35711 763 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 ITGA8P53708 1063 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 RTP1P59025 263 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 NSMFQ6X4W1 530 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 SIAH1Q8IUQ4 282 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 ALG13Q9NP73 1137 aaKnown RBP17.3■□□□□ 0.36
LINC00554-201ENST00000564841 CHST7Q9NS84 486 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 ARL8BQ9NVJ2 186 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 PARP2Q9UGN5 583 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 ZFP69BQ9UJL9 534 aa17.3■□□□□ 0.36
LINC00554-201ENST00000564841 NCANO14594 1321 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 ZSCAN9O15535 394 aaPredicted RBP17.29■□□□□ 0.36
LINC00554-201ENST00000564841 IL9RQ01113 521 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 SIX1Q15475 284 aaPredicted RBP17.29■□□□□ 0.36
LINC00554-201ENST00000564841 TRMT10CQ7L0Y3 403 aaKnown RBP17.29■□□□□ 0.36
LINC00554-201ENST00000564841 CCDC125Q86Z20 511 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 SCYL3Q8IZE3 742 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 OPTNQ96CV9 577 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 TRAPPC9Q96Q05 1148 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 ZSWIM1Q9BR11 485 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 RAB34Q9BZG1 259 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 PASKQ96RG2 1323 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 A6NJR5 290 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 EXOC3O60645 756 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 TRIM49P0CI25 452 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 TRIM49CP0CI26 452 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 PTPN4P29074 926 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 CPA2P48052 419 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 PPP2R5CQ13362 524 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 PABPC1LQ4VXU2 614 aaKnown RBP17.29■□□□□ 0.36
LINC00554-201ENST00000564841 RSBN1LQ6PCB5 846 aaPredicted RBP17.29■□□□□ 0.36
LINC00554-201ENST00000564841 RDH13Q8NBN7 331 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 C10orf82Q8WW14 230 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 PTPRN2Q92932 1015 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 CCDC17Q96LX7 622 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 TAOK3Q9H2K8 898 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 ZBTB5O15062 677 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 NDUFB10O96000 172 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 FTLP02792 175 aaPredicted RBP17.29■□□□□ 0.36
LINC00554-201ENST00000564841 RPA3P35244 121 aaPredicted RBP17.29■□□□□ 0.36
LINC00554-201ENST00000564841 MAGEA10P43363 369 aaPredicted RBP17.29■□□□□ 0.36
LINC00554-201ENST00000564841 DEUP1Q05D60 604 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 SLC1A5Q15758 541 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 PPP2R5EQ16537 467 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 CMPK2Q5EBM0 449 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 NLRP9Q7RTR0 991 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 GPR88Q9GZN0 384 aa17.29■□□□□ 0.36
LINC00554-201ENST00000564841 POC1B-GALNT4F8VUJ3 575 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 ASMTLO95671 621 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 LYNP07948 512 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 AMPD1P23109 780 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 RASSF2P50749 326 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 MKRN3Q13064 507 aaKnown RBP17.28■□□□□ 0.36
LINC00554-201ENST00000564841 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 NCAPG2Q86XI2 1143 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 SLC13A5Q86YT5 568 aaPredicted RBP17.28■□□□□ 0.36
LINC00554-201ENST00000564841 NIM1KQ8IY84 436 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 HERPUD2Q9BSE4 406 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 IDI2Q9BXS1 227 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 DMAP1Q9NPF5 467 aaPredicted RBP17.28■□□□□ 0.36
LINC00554-201ENST00000564841 GJA3Q9Y6H8 435 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 SYNGAP1Q96PV0 1343 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 MAGEA13PA6NCF6 341 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 FAM47DPA6NHR8 397 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 EYA4O95677 639 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms