RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 TREML1Q86YW5 311 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 APOBEC3FQ8IUX4 373 aaKnown RBP9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 LRRC57Q8N9N7 239 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 GRAMD1AQ96CP6 724 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 PYM1Q9BRP8 204 aaKnown RBP9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 ERP44Q9BS26 406 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 PITPNM3Q9BZ71 974 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 KCNK9Q9NPC2 374 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 ZNF212Q9UDV6 495 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 WASF2Q9Y6W5 498 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 V9GY48 417 aaPredicted RBP9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 PCNTO95613 3336 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 MAPK13O15264 365 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 PCP11498 1178 aaKnown RBP9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 TAC1P20366 129 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 KRT2P35908 639 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 RGS2P41220 211 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 CYLC2Q14093 348 aaPredicted RBP9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 ABCB5Q2M3G0 1257 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 NAALADL2Q58DX5 795 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 IFIT1BQ5T764 474 aaKnown RBP9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 TATDN1Q6P1N9 297 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 IZUMO2Q6UXV1 221 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 MOB2Q70IA6 237 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 NEDD1Q8NHV4 660 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 MAGEB18Q96M61 343 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 PHF20Q9BVI0 1012 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 NT5C3AQ9H0P0 336 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 DDX18Q9NVP1 670 aaKnown RBP9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 KIAA1522Q9P206 1035 aaPredicted RBP9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 ITGB1BP2Q9UKP3 347 aa9.73□□□□□ -0.85
AC138869.3-201ENST00000563960 SMIM31A0A1B0GVY4 71 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 BICDL2A1A5D9 508 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 RIPK2O43353 540 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 NDUFB5O43674 189 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 SERPING1P05155 500 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 HARSP12081 509 aaKnown RBP9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 FOXN2P32314 431 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 GTF2H1P32780 548 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 STX2P32856 288 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 HALP42357 657 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 CDR2Q01850 454 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 PPP2R5CQ13362 524 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 LONRF1Q17RB8 773 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 TTC38Q5R3I4 469 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 THOC7Q6I9Y2 204 aaKnown RBP9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 LRRC8BQ6P9F7 803 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 KLHL35Q6PF15 583 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 CATIPQ7Z7H3 387 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 LRRC47Q8N1G4 583 aaKnown RBP9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 HSPBAP1Q96EW2 488 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 POLR3CQ9BUI4 534 aaPredicted RBP9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 SYNCQ9H7C4 482 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 ZNF408Q9H9D4 720 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 FAIMQ9NVQ4 179 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 TBCCD1Q9NVR7 557 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 HERC5Q9UII4 1024 aaKnown RBP9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 CROTQ9UKG9 612 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 ZNF148Q9UQR1 794 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 SNX24Q9Y343 169 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 KANSL1LA0AUZ9 987 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 VILLO15195 856 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 BIRC5O15392 142 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 XBP1P17861 261 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 VPS41P49754 854 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 ARFIP2P53365 341 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 MAP3K10Q02779 954 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 DCTN2Q13561 401 aaKnown RBP9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 ITGA7Q13683 1181 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 PPP2R5BQ15173 497 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 SMUG1Q53HV7 270 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 SIAH1Q8IUQ4 282 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 FNDC8Q8TC99 324 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 DQX1Q8TE96 717 aaKnown RBP9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 GLG1Q92896 1179 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 DGCR14Q96DF8 476 aaKnown RBP9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 SNX27Q96L92 541 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 TMEM47Q9BQJ4 181 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
AC138869.3-201ENST00000563960 NAV1Q8NEY1 1877 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 PITPNM2Q9BZ72 1349 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 KIAA0391O15091 583 aaKnown RBP9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 WDR46O15213 610 aaKnown RBP9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 OPHN1O60890 802 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 DCTN3O75935 186 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 COL6A2P12110 1019 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 COPB2P35606 906 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 POLR2FP61218 127 aaKnown RBP9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 DR1Q01658 176 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 DSG1Q02413 1049 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 TROAPQ12815 778 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 MOGSQ13724 837 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 MYBPC2Q14324 1141 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 TAF1BQ53T94 588 aaPredicted RBP9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 SLC2A7Q6PXP3 512 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 B3GNT6Q6ZMB0 384 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 ECSITQ9BQ95 431 aa9.71□□□□□ -0.85
AC138869.3-201ENST00000563960 EPB41L1Q9H4G0 881 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms