RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 FAM109BQ6ICB4 259 aaPredicted RBP29.18■■■□□ 2.26
SH3GL3-205ENST00000563901 C15orf39Q6ZRI6 1047 aa29.18■■■□□ 2.26
SH3GL3-205ENST00000563901 ZNF689Q96CS4 500 aaPredicted RBP29.18■■■□□ 2.26
SH3GL3-205ENST00000563901 ANKRD36BP1Q96IX9 119 aa29.18■■■□□ 2.26
SH3GL3-205ENST00000563901 MTIF3Q9H2K0 278 aaKnown RBP29.18■■■□□ 2.26
SH3GL3-205ENST00000563901 TMEM8AQ9HCN3 771 aa29.18■■■□□ 2.26
SH3GL3-205ENST00000563901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.18■■■□□ 2.264e-10■■■■■ 97.2
SH3GL3-205ENST00000563901 DPP3Q9NY33 737 aa29.18■■■□□ 2.26
SH3GL3-205ENST00000563901 CASTOR2A6NHX0 329 aa29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 GJB5O95377 273 aa29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 TNNC2P02585 160 aa29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 MYL7Q01449 175 aa29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 MLLT1Q03111 559 aaPredicted RBP29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 ZACNQ401N2 412 aa29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 TRAPPC11Q7Z392 1133 aa29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 HERC6Q8IVU3 1022 aa29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 SLC9A7Q96T83 725 aa29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 PAAF1Q9BRP4 392 aa29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 UBQLN1Q9UMX0 589 aaKnown RBP29.17■■■□□ 2.26
SH3GL3-205ENST00000563901 GOLGA6L3A6NEY3 463 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 GRXCR1A8MXD5 290 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 PPEF2O14830 753 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 TEX33O43247 280 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 VNN1O95497 513 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 ITGB3P05106 788 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 IGFBP6P24592 240 aaPredicted RBP29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 RNASELQ05823 741 aaKnown RBP29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 TAS1R2Q8TE23 839 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 CACTINQ8WUQ7 758 aaKnown RBP29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 YME1L1Q96TA2 773 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 DNAJB4Q9UDY4 337 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 SIX4Q9UIU6 781 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 LGALS16A8MUM7 142 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 KRT39Q6A163 491 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 NT5DC4Q86YG4 428 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 BEST2Q8NFU1 509 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 CXorf38Q8TB03 319 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 CRACR2AQ9BSW2 395 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 ZBED2Q9BTP6 218 aa29.16■■■□□ 2.26
SH3GL3-205ENST00000563901 A0A1B0GTH6 734 aa29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 STX10O60499 249 aa29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 CST3P01034 146 aaPredicted RBP29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 TPM2P07951 284 aa29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 KRT19P08727 400 aa29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 GTF2H1P32780 548 aa29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 RABGGTBP53611 331 aa29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 UBASH3AP57075 661 aa29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 SEMA4DQ92854 862 aa29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 XPO4Q9C0E2 1151 aaKnown RBP29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 RTN4Q9NQC3 1192 aaKnown RBP29.15■■■□□ 2.26
SH3GL3-205ENST00000563901 PHACTR2O75167 634 aa29.14■■■□□ 2.26
SH3GL3-205ENST00000563901 POLR2BP30876 1174 aaKnown RBP29.14■■■□□ 2.26
SH3GL3-205ENST00000563901 GSE1Q14687 1217 aa29.14■■■□□ 2.26
SH3GL3-205ENST00000563901 UVSSAQ2YD98 709 aa29.14■■■□□ 2.26
SH3GL3-205ENST00000563901 NRDE2Q9H7Z3 1164 aa29.14■■■□□ 2.26
SH3GL3-205ENST00000563901 GRPEL1Q9HAV7 217 aa29.14■■■□□ 2.26
SH3GL3-205ENST00000563901 SLC38A7Q9NVC3 462 aa29.14■■■□□ 2.26
SH3GL3-205ENST00000563901 F8W810 466 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 HLA-DRAP01903 254 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 CLCNKBP51801 687 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 AP3M2P53677 418 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 UBXN1Q04323 297 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 DSC1Q08554 894 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 TUSC3Q13454 348 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 LRRC43Q8N309 656 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 PHOSPHO2Q8TCD6 241 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 PI4K2AQ9BTU6 479 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 KANSL3Q9P2N6 904 aa29.13■■■□□ 2.25
SH3GL3-205ENST00000563901 PBX3P40426 434 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 PIK3CAP42336 1068 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 KLK7P49862 253 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 HTRA4P83105 476 aaPredicted RBP29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 BTG3Q14201 252 aaPredicted RBP29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 C9orf57Q5W0N0 161 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 COLGALT2Q8IYK4 626 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 FAM193BQ96PV7 902 aaPredicted RBP29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 TSPAN18Q96SJ8 248 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 MRPL9Q9BYD2 267 aaKnown RBP29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 AGAP1Q9UPQ3 857 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 LCHNA4D1U4 455 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 XPOTO43592 962 aaKnown RBP29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 ZC3H11AO75152 810 aaKnown RBP eCLIP29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 CYP3A5P20815 502 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 APBA1Q02410 837 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 NCOA4Q13772 614 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 NR1I3Q14994 352 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 CWH43Q9H720 699 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 ITGA11Q9UKX5 1188 aa29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 MRPL42Q9Y6G3 142 aaKnown RBP29.12■■■□□ 2.25
SH3GL3-205ENST00000563901 TLL1O43897 1013 aa29.11■■■□□ 2.25
SH3GL3-205ENST00000563901 MYOGP15173 224 aa29.11■■■□□ 2.25
SH3GL3-205ENST00000563901 MYL6P60660 151 aa29.11■■■□□ 2.25
SH3GL3-205ENST00000563901 FILIP1LQ4L180 1135 aa29.11■■■□□ 2.25
SH3GL3-205ENST00000563901 EPC2Q52LR7 807 aa29.11■■■□□ 2.25
SH3GL3-205ENST00000563901 SARM1Q6SZW1 724 aa29.11■■■□□ 2.25
SH3GL3-205ENST00000563901 C3orf58Q8NDZ4 430 aa29.11■■■□□ 2.25
SH3GL3-205ENST00000563901 FBXL13Q8NEE6 735 aa29.11■■■□□ 2.25
SH3GL3-205ENST00000563901 GCNT4Q9P109 453 aa29.11■■■□□ 2.25
SH3GL3-205ENST00000563901 NLRC5Q86WI3 1866 aa29.1■■■□□ 2.25
SH3GL3-205ENST00000563901 N4BP1O75113 896 aaKnown RBP29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms