RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 EPN1Q9Y6I3 576 aaPredicted RBP23.64■■□□□ 1.37
LINC01960-201ENST00000563759 USP27XA6NNY8 438 aa23.63■■□□□ 1.37
LINC01960-201ENST00000563759 ZSCAN12O43309 604 aa23.63■■□□□ 1.37
LINC01960-201ENST00000563759 PQBP1O60828 265 aaKnown RBP23.63■■□□□ 1.37
LINC01960-201ENST00000563759 KRT19P08727 400 aa23.63■■□□□ 1.37
LINC01960-201ENST00000563759 ATN1P54259 1190 aaPredicted RBP23.63■■□□□ 1.37
LINC01960-201ENST00000563759 GCNT1Q02742 428 aa23.63■■□□□ 1.37
LINC01960-201ENST00000563759 SPOPLQ6IQ16 392 aa23.63■■□□□ 1.37
LINC01960-201ENST00000563759 TATDN2Q93075 761 aa23.63■■□□□ 1.37
LINC01960-201ENST00000563759 OSBPL7Q9BZF2 842 aa23.63■■□□□ 1.37
LINC01960-201ENST00000563759 SQORQ9Y6N5 450 aa23.63■■□□□ 1.37
LINC01960-201ENST00000563759 CCDC172P0C7W6 258 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 EIF4A3P38919 411 aaKnown RBP23.62■■□□□ 1.37
LINC01960-201ENST00000563759 ENOSF1Q7L5Y1 443 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 SMG8Q8ND04 991 aaKnown RBP23.62■■□□□ 1.37
LINC01960-201ENST00000563759 KREMEN1Q96MU8 473 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 FAM105AQ9NUU6 356 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 PCDHB2Q9Y5E7 798 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 BZW2Q9Y6E2 419 aaKnown RBP23.62■■□□□ 1.37
LINC01960-201ENST00000563759 SSU72P8A0A1W2PR75 194 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 TLR3O15455 904 aaKnown RBP23.62■■□□□ 1.37
LINC01960-201ENST00000563759 AKR1B10O60218 316 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 EVI5O60447 810 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 CST3P01034 146 aaPredicted RBP23.62■■□□□ 1.37
LINC01960-201ENST00000563759 ITGB3P05106 788 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 USP8P40818 1118 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 MYL6P60660 151 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 BFSP2Q13515 415 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 ZNF699Q32M78 642 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 HACE1Q8IYU2 909 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 C1orf127Q8N9H9 656 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 ACRBPQ8NEB7 543 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 HAUS4Q9H6D7 363 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 KCND1Q9NSA2 647 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 DERAQ9Y315 318 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 R3HCC1Q9Y3T6 440 aaKnown RBP23.62■■□□□ 1.37
LINC01960-201ENST00000563759 ADGRG1Q9Y653 693 aa23.62■■□□□ 1.37
LINC01960-201ENST00000563759 FOXN3O00409 490 aaPredicted RBP23.61■■□□□ 1.37
LINC01960-201ENST00000563759 OFD1O75665 1012 aa23.61■■□□□ 1.37
LINC01960-201ENST00000563759 ASS1P00966 412 aaKnown RBP23.61■■□□□ 1.37
LINC01960-201ENST00000563759 CD4P01730 458 aa23.61■■□□□ 1.37
LINC01960-201ENST00000563759 KIF11P52732 1056 aa23.61■■□□□ 1.37
LINC01960-201ENST00000563759 LRRC8DQ7L1W4 858 aa23.61■■□□□ 1.37
LINC01960-201ENST00000563759 IRF2BP2Q7Z5L9 587 aa23.61■■□□□ 1.37
LINC01960-201ENST00000563759 PPP1R13BQ96KQ4 1090 aa23.61■■□□□ 1.37
LINC01960-201ENST00000563759 SPTLC3Q9NUV7 552 aa23.61■■□□□ 1.37
LINC01960-201ENST00000563759 CNTN3Q9P232 1028 aa23.61■■□□□ 1.37
LINC01960-201ENST00000563759 SCN1AP35498 2009 aa23.61■■□□□ 1.37
LINC01960-201ENST00000563759 TDRD15B5MCY1 1934 aaKnown RBP23.6■■□□□ 1.37
LINC01960-201ENST00000563759 PRKCIP41743 596 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 MAPK8IP2Q13387 824 aaPredicted RBP23.6■■□□□ 1.37
LINC01960-201ENST00000563759 SGSM1Q2NKQ1 1148 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 GLRA4Q5JXX5 417 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 TRAF7Q6Q0C0 670 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 SHC3Q92529 594 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 ARID3AQ99856 593 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 APOBEC3GQ9HC16 384 aaKnown RBP23.6■■□□□ 1.37
LINC01960-201ENST00000563759 KLK14Q9P0G3 267 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 ITGA11Q9UKX5 1188 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 SELPP16109 830 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 TBXAS1P24557 533 aaPredicted RBP23.6■■□□□ 1.37
LINC01960-201ENST00000563759 MNX1P50219 401 aaPredicted RBP23.6■■□□□ 1.37
LINC01960-201ENST00000563759 PTK2Q05397 1052 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 SCARA3Q6AZY7 606 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 RNF39Q9H2S5 420 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 NUB1Q9Y5A7 615 aa23.6■■□□□ 1.37
LINC01960-201ENST00000563759 SCN5AQ14524 2016 aa23.59■■□□□ 1.37
LINC01960-201ENST00000563759 EIF3CLB5ME19 914 aaKnown RBP23.59■■□□□ 1.37
LINC01960-201ENST00000563759 GJA8P48165 433 aa23.59■■□□□ 1.37
LINC01960-201ENST00000563759 CUL2Q13617 745 aa23.59■■□□□ 1.37
LINC01960-201ENST00000563759 ALKAL1Q6UXT8 129 aa23.59■■□□□ 1.37
LINC01960-201ENST00000563759 SLC39A5Q6ZMH5 540 aa23.59■■□□□ 1.37
LINC01960-201ENST00000563759 ZMAT2Q96NC0 199 aaKnown RBP23.59■■□□□ 1.37
LINC01960-201ENST00000563759 EIF3CQ99613 913 aaKnown RBP23.59■■□□□ 1.37
LINC01960-201ENST00000563759 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.59■■□□□ 1.37
LINC01960-201ENST00000563759 IFIH1Q9BYX4 1025 aaKnown RBP23.59■■□□□ 1.37
LINC01960-201ENST00000563759 CXCL16Q9H2A7 254 aa23.59■■□□□ 1.37
LINC01960-201ENST00000563759 RRAGDQ9NQL2 400 aaPredicted RBP23.59■■□□□ 1.37
LINC01960-201ENST00000563759 DPP3Q9NY33 737 aa23.59■■□□□ 1.37
LINC01960-201ENST00000563759 SIX4Q9UIU6 781 aa23.59■■□□□ 1.37
LINC01960-201ENST00000563759 RAB27AP51159 221 aa23.58■■□□□ 1.37
LINC01960-201ENST00000563759 GUCY2FP51841 1108 aa23.58■■□□□ 1.37
LINC01960-201ENST00000563759 KRT83P78385 493 aa23.58■■□□□ 1.37
LINC01960-201ENST00000563759 MBTPS1Q14703 1052 aa23.58■■□□□ 1.37
LINC01960-201ENST00000563759 SPA17Q15506 151 aa23.58■■□□□ 1.37
LINC01960-201ENST00000563759 UMODL1Q5DID0 1318 aa23.58■■□□□ 1.37
LINC01960-201ENST00000563759 VPS36Q86VN1 386 aa23.58■■□□□ 1.37
LINC01960-201ENST00000563759 DIS3LQ8TF46 1054 aaKnown RBP23.58■■□□□ 1.37
LINC01960-201ENST00000563759 NIF3L1Q9GZT8 377 aa23.58■■□□□ 1.37
LINC01960-201ENST00000563759 MGEA5O60502 916 aa23.58■■□□□ 1.36
LINC01960-201ENST00000563759 ITGA4P13612 1032 aa23.58■■□□□ 1.36
LINC01960-201ENST00000563759 KRT5P13647 590 aa23.58■■□□□ 1.36
LINC01960-201ENST00000563759 POLR2BP30876 1174 aaKnown RBP23.58■■□□□ 1.36
LINC01960-201ENST00000563759 BEST2Q8NFU1 509 aa23.58■■□□□ 1.36
LINC01960-201ENST00000563759 TAF4BQ92750 862 aa23.58■■□□□ 1.36
LINC01960-201ENST00000563759 ADAM2Q99965 735 aa23.58■■□□□ 1.36
LINC01960-201ENST00000563759 PITPNM1O00562 1244 aa23.57■■□□□ 1.36
LINC01960-201ENST00000563759 ANKRD33Q7Z3H0 272 aa23.57■■□□□ 1.36
LINC01960-201ENST00000563759 ZNF571Q7Z3V5 609 aaPredicted RBP23.57■■□□□ 1.36
LINC01960-201ENST00000563759 FAM71AQ8IYT1 594 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms