RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 DDAH1O94760 285 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 PLATP00750 562 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 GH2P01242 217 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 ITGAVP06756 1048 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 SNRPB2P08579 225 aaKnown RBP5.31□□□□□ -1.56
CDR2-203ENST00000563573 XBP1P17861 261 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 GJB2P29033 226 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 LTBRP36941 435 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 BCL6P41182 706 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 LSAMPQ13449 338 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 TRIM29Q14134 588 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 NAALADL2Q58DX5 795 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 LARP1BQ659C4 914 aaKnown RBP5.31□□□□□ -1.56
CDR2-203ENST00000563573 APOA5Q6Q788 366 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 C6orf15Q6UXA7 325 aaPredicted RBP5.31□□□□□ -1.56
CDR2-203ENST00000563573 KRT26Q7Z3Y9 468 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 GGNQ86UU5 652 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 MICU3Q86XE3 530 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 BTN2A2Q8WVV5 523 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 CEP95Q96GE4 821 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 SAMD11Q96NU1 681 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 TMEM47Q9BQJ4 181 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 AS3MTQ9HBK9 375 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 PRKAG3Q9UGI9 489 aa5.31□□□□□ -1.56
CDR2-203ENST00000563573 SCAF8Q9UPN6 1271 aaKnown RBP5.31□□□□□ -1.56
CDR2-203ENST00000563573 PLIN4Q96Q06 1357 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 ASTN2O75129 1339 aaPredicted RBP5.3□□□□□ -1.56
CDR2-203ENST00000563573 IGKV6D-41A0A0C4DH26 115 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 H3BQV1 296 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 SUSD5O60279 629 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 LARGE1O95461 756 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 PARP1P09874 1014 aaKnown RBP5.3□□□□□ -1.56
CDR2-203ENST00000563573 EEF2P13639 858 aaKnown RBP5.3□□□□□ -1.56
CDR2-203ENST00000563573 IFNAR1P17181 557 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 SMARCA1P28370 1054 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 ECI1P42126 302 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 KCNJ6P48051 423 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 NOVP48745 357 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 USP14P54578 494 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 ITGA1P56199 1179 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 KRTAP10-2P60368 255 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 ICA1Q05084 483 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 TROAPQ12815 778 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 PRKG1Q13976 671 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 SEPT2Q15019 361 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 PRAMEF18Q5VWM3 479 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 SLFN13Q68D06 897 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 ARMC9Q7Z3E5 817 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 PLEKHH3Q7Z736 793 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 ZNF227Q86WZ6 799 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 LCORQ96JN0 433 aaPredicted RBP5.3□□□□□ -1.56
CDR2-203ENST00000563573 WRNIP1Q96S55 665 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 RBM15Q96T37 977 aaKnown RBP eCLIP5.3□□□□□ -1.56
CDR2-203ENST00000563573 MYL10Q9BUA6 226 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 DNAJC18Q9H819 358 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 NCOA5Q9HCD5 579 aaKnown RBP5.3□□□□□ -1.56
CDR2-203ENST00000563573 SMPD4Q9NXE4 827 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 ORC3Q9UBD5 711 aaPredicted RBP5.3□□□□□ -1.56
CDR2-203ENST00000563573 ZNF112Q9UJU3 913 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 ISY1Q9ULR0 285 aaKnown RBP5.3□□□□□ -1.56
CDR2-203ENST00000563573 SYNPO2Q9UMS6 1093 aa5.3□□□□□ -1.56
CDR2-203ENST00000563573 WDR33Q9C0J8 1336 aaKnown RBP5.29□□□□□ -1.56
CDR2-203ENST00000563573 GREB1LQ9C091 1923 aaPredicted RBP5.29□□□□□ -1.56
CDR2-203ENST00000563573 DOCK1Q14185 1865 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 C19orf81C9J6K1 198 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 ADM5C9JUS6 153 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 KLRF2D3W0D1 207 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 F5H6K3 240 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 PRPF3O43395 683 aaKnown RBP5.29□□□□□ -1.56
CDR2-203ENST00000563573 STX6O43752 255 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 DGKIO75912 1065 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 DEXIO95424 95 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 RXRAP19793 462 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 FPR2P25090 351 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 SLC1A4P43007 532 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 KLRC3Q07444 240 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 TRAF1Q13077 416 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 IKQ13123 557 aaPredicted RBP5.29□□□□□ -1.56
CDR2-203ENST00000563573 GRM4Q14833 912 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 ASPRV1Q53RT3 343 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 PRR31Q5SQ13 230 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 GPATCH4Q5T3I0 446 aaKnown RBP5.29□□□□□ -1.56
CDR2-203ENST00000563573 EEPD1Q7L9B9 569 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 MCF2L2Q86YR7 1114 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 RAB11FIP4Q86YS3 637 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 PPIL6Q8IXY8 311 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 ANKRD13AQ8IZ07 590 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 SCYL3Q8IZE3 742 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 C2orf69Q8N8R5 385 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 TXNDC5Q8NBS9 432 aaKnown RBP5.29□□□□□ -1.56
CDR2-203ENST00000563573 KREMEN2Q8NCW0 462 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 NSUN7Q8NE18 718 aaKnown RBP5.29□□□□□ -1.56
CDR2-203ENST00000563573 GMCL1P1Q8NEA9 526 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 PHOSPHO1Q8TCT1 267 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 CHURC1Q8WUH1 139 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 DCAF4Q8WV16 495 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 ZKSCAN4Q969J2 545 aaPredicted RBP5.29□□□□□ -1.56
CDR2-203ENST00000563573 CDCA5Q96FF9 252 aa5.29□□□□□ -1.56
CDR2-203ENST00000563573 TOE1Q96GM8 510 aaKnown RBP5.29□□□□□ -1.56
CDR2-203ENST00000563573 CHAMP1Q96JM3 812 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms