RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 MBTPS2O43462 519 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 C1RP00736 705 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 PRR29P0C7W0 189 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 FGFR3P22607 806 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 ANP32AP39687 249 aaKnown RBP20.31■□□□□ 0.84
CDH11-206ENST00000562998 CLCN4P51793 760 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 SPAG1Q07617 926 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 DPYDQ12882 1025 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 KMT5BQ4FZB7 885 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 PTCRAQ6ISU1 281 aaPredicted RBP20.31■□□□□ 0.84
CDH11-206ENST00000562998 ANKRD54Q6NXT1 300 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 SYCE2Q6PIF2 218 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 EP400NLQ6ZTU2 488 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 SYCP3Q8IZU3 236 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 TMEM130Q8N3G9 435 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 PIK3R5Q8WYR1 880 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 KIF12Q96FN5 646 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 EMILIN2Q9BXX0 1053 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 UBQLN1Q9UMX0 589 aaKnown RBP20.31■□□□□ 0.84
CDH11-206ENST00000562998 C5orf42Q9H799 3197 aa20.31■□□□□ 0.84
CDH11-206ENST00000562998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.3■□□□□ 0.84
CDH11-206ENST00000562998 C2CD2LO14523 706 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 KIAA0391O15091 583 aaKnown RBP20.3■□□□□ 0.84
CDH11-206ENST00000562998 LDHAP00338 332 aaKnown RBP20.3■□□□□ 0.84
CDH11-206ENST00000562998 WNT7BP56706 349 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 STK4Q13043 487 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 PSMD2Q13200 908 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 SMAD4Q13485 552 aaKnown RBP20.3■□□□□ 0.84
CDH11-206ENST00000562998 SMAD2Q15796 467 aaKnown RBP20.3■□□□□ 0.84
CDH11-206ENST00000562998 FAM171A1Q5VUB5 890 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 SPATA1Q5VX52 437 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 JADE1Q6IE81 842 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.3■□□□□ 0.84
CDH11-206ENST00000562998 PPFIBP1Q86W92 1011 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 KIAA0895Q8NCT3 520 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 LNX1Q8TBB1 728 aaPredicted RBP20.3■□□□□ 0.84
CDH11-206ENST00000562998 ADAMTS19Q8TE59 1207 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 CASP10Q92851 521 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 TTPALQ9BTX7 342 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 SLC39A2Q9NP94 309 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.3■□□□□ 0.84
CDH11-206ENST00000562998 CHMP5Q9NZZ3 219 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 C2CD2Q9Y426 696 aa20.3■□□□□ 0.84
CDH11-206ENST00000562998 CUL9Q8IWT3 2517 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 EXTL3O43909 919 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 NFICP08651 508 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 IL9P15248 144 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 EPCAMP16422 314 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 HOXB8P17481 243 aaPredicted RBP20.29■□□□□ 0.84
CDH11-206ENST00000562998 BRCC3P46736 316 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 SNRPFP62306 86 aaKnown RBP20.29■□□□□ 0.84
CDH11-206ENST00000562998 KIAA1841Q6NSI8 718 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 LLGL2Q6P1M3 1020 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 BRSK2Q8IWQ3 736 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 RIN2Q8WYP3 895 aaPredicted RBP20.29■□□□□ 0.84
CDH11-206ENST00000562998 SUSD6Q92537 303 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 SAAL1Q96ER3 474 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 FBXL18Q96ME1 805 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 FAM213AQ9BRX8 229 aa20.29■□□□□ 0.84
CDH11-206ENST00000562998 PLXNA3P51805 1871 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 ANO9A1A5B4 782 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 TRAPPC3O43617 180 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 RHOBTB3O94955 611 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 RPN1P04843 607 aaKnown RBP20.28■□□□□ 0.84
CDH11-206ENST00000562998 SRGAP2BP0DMP2 458 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 KLRC2P26717 231 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 CA8P35219 290 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 AARSP49588 968 aaKnown RBP eCLIP20.28■□□□□ 0.84
CDH11-206ENST00000562998 CLUL1Q15846 466 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 ARMCX5Q6P1M9 558 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 LILRA6Q6PI73 481 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 PRSS55Q6UWB4 352 aaPredicted RBP20.28■□□□□ 0.84
CDH11-206ENST00000562998 C12orf56Q8IXR9 622 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 EFCAB13Q8IY85 973 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 TMEM87AQ8NBN3 555 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 TMEM174Q8WUU8 243 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 SUSD3Q96L08 255 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 CLSTN3Q9BQT9 956 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 AGPAT3Q9NRZ7 376 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 NCOR1O75376 2440 aa20.28■□□□□ 0.84
CDH11-206ENST00000562998 XPOTO43592 962 aaKnown RBP20.27■□□□□ 0.84
CDH11-206ENST00000562998 IL18RAPO95256 599 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 PAPLNO95428 1278 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 ADH1AP07327 375 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 GUCY2FP51841 1108 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 CREMQ03060 361 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 FAM160A1Q05DH4 1040 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 MRPL58Q14197 206 aaKnown RBP20.27■□□□□ 0.84
CDH11-206ENST00000562998 KCNB1Q14721 858 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 TMEM132DQ14C87 1099 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 KNOP1Q1ED39 458 aaKnown RBP20.27■□□□□ 0.84
CDH11-206ENST00000562998 TPRNQ4KMQ1 711 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 KANK3Q6NY19 840 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 NT5DC4Q86YG4 428 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 GPD1LQ8N335 351 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 PCIF1Q9H4Z3 704 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 EXOC1Q9NV70 894 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 CGNQ9P2M7 1197 aaKnown RBP20.27■□□□□ 0.84
CDH11-206ENST00000562998 BDP1A6H8Y1 2624 aa20.27■□□□□ 0.84
CDH11-206ENST00000562998 GOLGA8IPA6NC78 632 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms