RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 ZNF830Q96NB3 372 aaPredicted RBP15.01□□□□□ -0.01
CLK3-209ENST00000562670 TMEM106CQ9BVX2 250 aa15.01□□□□□ -0.01
CLK3-209ENST00000562670 IFIH1Q9BYX4 1025 aaKnown RBP15.01□□□□□ -0.01
CLK3-209ENST00000562670 GPR88Q9GZN0 384 aa15.01□□□□□ -0.01
CLK3-209ENST00000562670 UBN1Q9NPG3 1134 aa15.01□□□□□ -0.01
CLK3-209ENST00000562670 NLRC4Q9NPP4 1024 aa15.01□□□□□ -0.01
CLK3-209ENST00000562670 DNAJC12Q9UKB3 198 aa15.01□□□□□ -0.01
CLK3-209ENST00000562670 TBX21Q9UL17 535 aa15.01□□□□□ -0.01
CLK3-209ENST00000562670 GIT1Q9Y2X7 761 aa15.01□□□□□ -0.01
CLK3-209ENST00000562670 BZW2Q9Y6E2 419 aaKnown RBP15.01□□□□□ -0.01
CLK3-209ENST00000562670 MGEA5O60502 916 aa15□□□□□ -0.01
CLK3-209ENST00000562670 PHACTR2O75167 634 aa15□□□□□ -0.01
CLK3-209ENST00000562670 CXCL10P02778 98 aa15□□□□□ -0.01
CLK3-209ENST00000562670 SERPING1P05155 500 aa15□□□□□ -0.01
CLK3-209ENST00000562670 CCDC172P0C7W6 258 aa15□□□□□ -0.01
CLK3-209ENST00000562670 FERP16591 822 aa15□□□□□ -0.01
CLK3-209ENST00000562670 CYP3A5P20815 502 aa15□□□□□ -0.01
CLK3-209ENST00000562670 SOX5P35711 763 aa15□□□□□ -0.01
CLK3-209ENST00000562670 STAT1P42224 750 aa15□□□□□ -0.01
CLK3-209ENST00000562670 FAAP100Q0VG06 881 aa15□□□□□ -0.01
CLK3-209ENST00000562670 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
CLK3-209ENST00000562670 SGSM1Q2NKQ1 1148 aa15□□□□□ -0.01
CLK3-209ENST00000562670 TRIM60Q495X7 471 aa15□□□□□ -0.01
CLK3-209ENST00000562670 NECAB2Q7Z6G3 386 aa15□□□□□ -0.01
CLK3-209ENST00000562670 ARHGEF19Q8IW93 802 aa15□□□□□ -0.01
CLK3-209ENST00000562670 DIS3LQ8TF46 1054 aaKnown RBP15□□□□□ -0.01
CLK3-209ENST00000562670 FAM212AQ96EL1 285 aa15□□□□□ -0.01
CLK3-209ENST00000562670 KIF12Q96FN5 646 aa15□□□□□ -0.01
CLK3-209ENST00000562670 XYLT2Q9H1B5 865 aa15□□□□□ -0.01
CLK3-209ENST00000562670 TSPYL2Q9H2G4 693 aaPredicted RBP15□□□□□ -0.01
CLK3-209ENST00000562670 HIPK3Q9H422 1215 aa15□□□□□ -0.01
CLK3-209ENST00000562670 RGS18Q9NS28 235 aa15□□□□□ -0.01
CLK3-209ENST00000562670 SIX4Q9UIU6 781 aa15□□□□□ -0.01
CLK3-209ENST00000562670 AJAP1Q9UKB5 411 aaPredicted RBP15□□□□□ -0.01
CLK3-209ENST00000562670 PYCARDQ9ULZ3 195 aa15□□□□□ -0.01
CLK3-209ENST00000562670 UBQLN1Q9UMX0 589 aaKnown RBP15□□□□□ -0.01
CLK3-209ENST00000562670 HES2Q9Y543 173 aa15□□□□□ -0.01
CLK3-209ENST00000562670 ESPNB1AK53 854 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 GFPT2O94808 682 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 RFC2P35250 354 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 TLE2Q04725 743 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 TRPC3Q13507 836 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 RAPGEF1Q13905 1077 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 DRAP1Q14919 205 aaPredicted RBP14.99□□□□□ -0.01
CLK3-209ENST00000562670 ASIC2Q16515 512 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 PLEKHG4Q58EX7 1191 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 HGSNATQ68CP4 663 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 ZNF598Q86UK7 904 aaKnown RBP14.99□□□□□ -0.01
CLK3-209ENST00000562670 PPM1KQ8N3J5 372 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 LRRC52Q8N7C0 313 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 BEST2Q8NFU1 509 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 RSPH1Q8WYR4 309 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 PGBD4Q96DM1 585 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 KREMEN1Q96MU8 473 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 OSBPL7Q9BZF2 842 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 NIF3L1Q9GZT8 377 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 MCOLN1Q9GZU1 580 aa14.99□□□□□ -0.01
CLK3-209ENST00000562670 UBE2TQ9NPD8 197 aaPredicted RBP14.99□□□□□ -0.01
CLK3-209ENST00000562670 ATP8B3O60423 1300 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 C9IYK1 514 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 CCP110O43303 1012 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 NBNO60934 754 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 ITGA4P13612 1032 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 ATF7P17544 494 aaPredicted RBP14.98□□□□□ -0.01
CLK3-209ENST00000562670 MSNP26038 577 aaKnown RBP14.98□□□□□ -0.01
CLK3-209ENST00000562670 ATN1P54259 1190 aaPredicted RBP14.98□□□□□ -0.01
CLK3-209ENST00000562670 FAM189BP81408 668 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 RBP5P82980 135 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 CUL2Q13617 745 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 GPNMBQ14956 572 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 ZNF699Q32M78 642 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 GJB7Q6PEY0 223 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 SLC24A5Q71RS6 500 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 IRF2BP2Q7Z5L9 587 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 UBE2Q1Q7Z7E8 422 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 FAM71AQ8IYT1 594 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 FAM84AQ96KN4 292 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 ZMAT2Q96NC0 199 aaKnown RBP14.98□□□□□ -0.01
CLK3-209ENST00000562670 PPP1R10Q96QC0 940 aaKnown RBP14.98□□□□□ -0.01
CLK3-209ENST00000562670 ADAM2Q99965 735 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 APOBEC3GQ9HC16 384 aaKnown RBP14.98□□□□□ -0.01
CLK3-209ENST00000562670 SLC38A7Q9NVC3 462 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 DPP3Q9NY33 737 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 ARHGAP20Q9P2F6 1191 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 CNTN6Q9UQ52 1028 aa14.98□□□□□ -0.01
CLK3-209ENST00000562670 SMIM28A0A1B0GU29 152 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 ANO9A1A5B4 782 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 SOWAHDA6NJG2 315 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 PTGESO14684 152 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 EVI5O60447 810 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 LRRN2O75325 713 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 LCA5LO95447 670 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 EOMESO95936 686 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 CST3P01034 146 aaPredicted RBP14.97□□□□□ -0.01
CLK3-209ENST00000562670 ITGB3P05106 788 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 CLTBP09497 229 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 AKAP5P24588 427 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 LRPAP1P30533 357 aa14.97□□□□□ -0.01
CLK3-209ENST00000562670 CYLC1P35663 651 aaPredicted RBP14.97□□□□□ -0.01
CLK3-209ENST00000562670 MYL6P60660 151 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms