RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 IL2RBP14784 551 aa6□□□□□ -1.45
SMG1-206ENST00000562668 KRT4P19013 534 aa6□□□□□ -1.45
SMG1-206ENST00000562668 PHC1P78364 1004 aa6□□□□□ -1.45
SMG1-206ENST00000562668 CNNM4Q6P4Q7 775 aa6□□□□□ -1.45
SMG1-206ENST00000562668 PPM1KQ8N3J5 372 aa6□□□□□ -1.45
SMG1-206ENST00000562668 ZNF276Q8N554 614 aa6□□□□□ -1.45
SMG1-206ENST00000562668 SMC1BQ8NDV3 1235 aa6□□□□□ -1.45
SMG1-206ENST00000562668 APPBP2Q92624 585 aa6□□□□□ -1.45
SMG1-206ENST00000562668 LENG9Q96B70 501 aa6□□□□□ -1.45
SMG1-206ENST00000562668 AGAP2Q99490 1192 aa6□□□□□ -1.45
SMG1-206ENST00000562668 FANCLQ9NW38 375 aa6□□□□□ -1.45
SMG1-206ENST00000562668 DMRT1Q9Y5R6 373 aa6□□□□□ -1.45
SMG1-206ENST00000562668 NHSQ6T4R5 1651 aa6□□□□□ -1.45
SMG1-206ENST00000562668 EP400Q96L91 3159 aa6□□□□□ -1.45
SMG1-206ENST00000562668 LY86O95711 162 aa5.99□□□□□ -1.45
SMG1-206ENST00000562668 OCRLQ01968 901 aa5.99□□□□□ -1.45
SMG1-206ENST00000562668 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
SMG1-206ENST00000562668 MRGPREQ86SM8 312 aa5.99□□□□□ -1.45
SMG1-206ENST00000562668 NIM1KQ8IY84 436 aa5.99□□□□□ -1.45
SMG1-206ENST00000562668 SYNE4Q8N205 404 aa5.99□□□□□ -1.45
SMG1-206ENST00000562668 HAS1Q92839 578 aa5.99□□□□□ -1.45
SMG1-206ENST00000562668 ZNF496Q96IT1 587 aaPredicted RBP5.99□□□□□ -1.45
SMG1-206ENST00000562668 ITGB4P16144 1822 aa5.99□□□□□ -1.45
SMG1-206ENST00000562668 SIPA1L3O60292 1781 aaPredicted RBP5.98□□□□□ -1.45
SMG1-206ENST00000562668 SCN11AQ9UI33 1791 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 DLG5Q8TDM6 1919 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 TMEM191CA6NGB0 347 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 NRP2O60462 931 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 HK1P19367 917 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 GPR15P49685 360 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 WNT3AP56704 352 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 CD69Q07108 199 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 SEPT7Q16181 437 aaKnown RBP5.98□□□□□ -1.45
SMG1-206ENST00000562668 DDB1Q16531 1140 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 CCDC178Q5BJE1 867 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 SULT6B1Q6IMI4 303 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 RHOUQ7L0Q8 258 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 KRT27Q7Z3Y8 459 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 RPUSD2Q8IZ73 545 aaKnown RBP5.98□□□□□ -1.45
SMG1-206ENST00000562668 ZNF610Q8N9Z0 462 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 GPR101Q96P66 508 aaPredicted RBP5.98□□□□□ -1.45
SMG1-206ENST00000562668 PDCD2LQ9BRP1 358 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 FDXACB1Q9BRP7 624 aaPredicted RBP5.98□□□□□ -1.45
SMG1-206ENST00000562668 TTPALQ9BTX7 342 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 TARS2Q9BW92 718 aaKnown RBP5.98□□□□□ -1.45
SMG1-206ENST00000562668 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.98□□□□□ -1.45
SMG1-206ENST00000562668 USP18Q9UMW8 372 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 RGPD3A6NKT7 1758 aaPredicted RBP5.98□□□□□ -1.45
SMG1-206ENST00000562668 RGPD4Q7Z3J3 1758 aa5.98□□□□□ -1.45
SMG1-206ENST00000562668 BTAF1O14981 1849 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 TRIM24O15164 1050 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 FOXN1O15353 648 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 HOXA3O43365 443 aaPredicted RBP5.97□□□□□ -1.45
SMG1-206ENST00000562668 CDC45O75419 566 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 CFBP00751 764 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 XPAP23025 273 aaPredicted RBP5.97□□□□□ -1.45
SMG1-206ENST00000562668 LSP1P33241 339 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 CASRP41180 1078 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 LSSP48449 732 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 SART3Q15020 963 aaKnown RBP5.97□□□□□ -1.45
SMG1-206ENST00000562668 PCBP1Q15365 356 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMG1-206ENST00000562668 LRRC55Q6ZSA7 311 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 PTF1AQ7RTS3 328 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 CXorf67Q86X51 503 aaPredicted RBP5.97□□□□□ -1.45
SMG1-206ENST00000562668 DHX37Q8IY37 1157 aaKnown RBP5.97□□□□□ -1.45
SMG1-206ENST00000562668 OR52N2Q8NGI0 321 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 IL17RAQ96F46 866 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 PLEKHF1Q96S99 279 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 CPPED1Q9BRF8 314 aaPredicted RBP5.97□□□□□ -1.45
SMG1-206ENST00000562668 EPC1Q9H2F5 836 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 MS4A5Q9H3V2 200 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 SORCS3Q9UPU3 1222 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 PLAAQ9Y263 795 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 KDM6AO15550 1401 aaPredicted RBP5.97□□□□□ -1.45
SMG1-206ENST00000562668 RREB1Q92766 1687 aa5.97□□□□□ -1.45
SMG1-206ENST00000562668 LY75O60449 1722 aa5.96□□□□□ -1.45
SMG1-206ENST00000562668 MRC1P22897 1456 aa5.96□□□□□ -1.45
SMG1-206ENST00000562668 PAPPAQ13219 1627 aa5.96□□□□□ -1.45
SMG1-206ENST00000562668 LCHNA4D1U4 455 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 EXOC5O00471 708 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 PPFIA4O75335 1185 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 HMOX1P09601 288 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 GYPEP15421 78 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 PHKG2P15735 406 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 NR4A1P22736 598 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 NRG3P56975 720 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 NANOS3P60323 173 aaKnown RBP5.96□□□□□ -1.46
SMG1-206ENST00000562668 PPARAQ07869 468 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 TERF2Q15554 542 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 METTL24Q5JXM2 366 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 GLB1L2Q8IW92 636 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 AHI1Q8N157 1196 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 MSL3Q8N5Y2 521 aaKnown RBP5.96□□□□□ -1.46
SMG1-206ENST00000562668 GLB1L3Q8NCI6 653 aaPredicted RBP5.96□□□□□ -1.46
SMG1-206ENST00000562668 OR5M3Q8NGP4 307 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 OR2W6PQ8NHA6 318 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 ZCRB1Q8TBF4 217 aaKnown RBP5.96□□□□□ -1.46
SMG1-206ENST00000562668 CPT1CQ8TCG5 803 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 GAB3Q8WWW8 586 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 MFSD3Q96ES6 412 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms