RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ACAP3Q96P50 834 aa18.29■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 C17orf75Q9HAS0 396 aa18.29■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 KCNH3Q9ULD8 1083 aa18.29■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 RBM19Q9Y4C8 960 aaKnown RBP18.29■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 WDR27A2RRH5 827 aa18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 ABLIM3O94929 683 aa18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 HARSP12081 509 aaKnown RBP18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 GUCY2CP25092 1073 aa18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 RAD51AP2Q09MP3 1159 aa18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 PNMA5Q96PV4 448 aa18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 NTPCRQ9BSD7 190 aaKnown RBP18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 TCHPQ9BT92 498 aa18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 DDX23Q9BUQ8 820 aaKnown RBP18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 R4GN57 208 aa18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 PDCD11Q14690 1871 aaKnown RBP18.28■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 ARHGEF37A1IGU5 675 aa18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 RHOP08100 348 aa18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 ATP2C1P98194 919 aaPredicted RBP18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 MRPL58Q14197 206 aaKnown RBP18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 SEZ6Q53EL9 994 aa18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 HYIQ5T013 277 aa18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 C1orf210Q8IVY1 113 aa18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 TMEM161BQ8NDZ6 487 aa18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 TIPINQ9BVW5 301 aa18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 ANKFY1Q9P2R3 1169 aa18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 MRPS23Q9Y3D9 190 aaKnown RBP18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 DNAH14Q0VDD8 3507 aa18.27■□□□□ 0.52
VPS9D1-AS1-201ENST00000562298 CITO14578 2027 aa18.27■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MIA3Q5JRA6 1907 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 KANSL1LA0AUZ9 987 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SYN3O14994 580 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TOM1L1O75674 476 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SP9P0CG40 484 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MAPTP10636 758 aaKnown RBP18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PLS3P13797 630 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ATF2P15336 505 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CEBPBP17676 345 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ARPP19P56211 112 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ZRSR1Q15695 479 aaKnown RBP18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MLF2Q15773 248 aaPredicted RBP18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SLC10A6Q3KNW5 377 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SLC44A4Q53GD3 710 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MAML2Q8IZL2 1156 aaPredicted RBP18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TMEM130Q8N3G9 435 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SYT2Q8N9I0 419 aaPredicted RBP18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SPIRE2Q8WWL2 714 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MCRS1Q96EZ8 462 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SHDQ96IW2 340 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PLA2G2FQ9BZM2 168 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 AVENQ9NQS1 362 aaPredicted RBP18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TUBGCP4Q9UGJ1 667 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 FBXL5Q9UKA1 691 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MTF2Q9Y483 593 aaPredicted RBP18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PATJQ8NI35 1801 aa18.26■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SPTBN4Q9H254 2564 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SEC24AO95486 1093 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 LRG1P02750 347 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 RPL9P32969 192 aaKnown RBP18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SLC12A3P55017 1021 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PRKCQQ04759 706 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 STRN3Q13033 797 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 NOLC1Q14978 699 aaKnown RBP eCLIP18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 RILPL1Q5EBL4 403 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PRSS36Q5K4E3 855 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MCTP1Q6DN14 999 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TCEAL8Q8IYN2 117 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SUSD3Q96L08 255 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PLIN2Q99541 437 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 HAPLN2Q9GZV7 340 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SEMA4AQ9H3S1 761 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 GDE1Q9NZC3 331 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 NUB1Q9Y5A7 615 aa18.25■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 VWA3AA6NCI4 1184 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 NRG2O14511 850 aaPredicted RBP18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PRRG1O14668 218 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ECI2O75521 394 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 LMNAP02545 664 aaKnown RBP18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PTPN2P17706 415 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CD72P21854 359 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PFKPQ01813 784 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TBC1D32Q96NH3 1257 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CORO1BQ9BR76 489 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CYP4F11Q9HBI6 524 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 INSL5Q9Y5Q6 135 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MYH11P35749 1972 aa18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 RIF1Q5UIP0 2472 aaKnown RBP18.24■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 FANCMQ8IYD8 2048 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 FAM186AA6NE01 2351 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 NPHP3-ACAD11A0A0J9YXS1 232 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 H7C4K7 107 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CXCL8P10145 99 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 FCARP24071 287 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ELF1P32519 619 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MCM4P33991 863 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CCR2P41597 374 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CACNB1Q02641 598 aaPredicted RBP18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 MCL1Q07820 350 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 UBXN2BQ14CS0 331 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CTXN3Q4LDR2 81 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TANGO2Q6ICL3 276 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms