RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 PTGESO14684 152 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 INPPL1O15357 1258 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 DDHD2O94830 711 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 KCNH2Q12809 1159 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 GRIN2CQ14957 1233 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 PTPN21Q16825 1174 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 CBWD2Q8IUF1 395 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 ARNTL2Q8WYA1 636 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 ERGIC2Q96RQ1 377 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 DNAJB4Q9UDY4 337 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 PLXNA4Q9HCM2 1894 aa24.31■■□□□ 1.48
SYNGR3-202ENST00000562045 AFPP02771 609 aaKnown RBP24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 ERVK-21P61565 698 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 ZNF697Q5TEC3 545 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 USP37Q86T82 979 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 LRRC43Q8N309 656 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 TGS1Q96RS0 853 aaKnown RBP24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 NRDE2Q9H7Z3 1164 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 UBN1Q9NPG3 1134 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 CACNG4Q9UBN1 327 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 ZNF233A6NK53 670 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 ACOT2P49753 483 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 VAMP7P51809 220 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 SLC10A6Q3KNW5 377 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 EPC2Q52LR7 807 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 GLRA4Q5JXX5 417 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 CRELD2Q6UXH1 353 aaPredicted RBP24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 ALKAL1Q6UXT8 129 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 HACE1Q8IYU2 909 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 TMEM130Q8N3G9 435 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 TRIM44Q96DX7 344 aaPredicted RBP24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 FAM213AQ9BRX8 229 aa24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 CCDC94Q9BW85 323 aaPredicted RBP24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.3■■□□□ 1.48
SYNGR3-202ENST00000562045 OGTO15294 1046 aa24.29■■□□□ 1.48
SYNGR3-202ENST00000562045 ADRB2P07550 413 aa24.29■■□□□ 1.48
SYNGR3-202ENST00000562045 CXCL8P10145 99 aa24.29■■□□□ 1.48
SYNGR3-202ENST00000562045 GSDMDP57764 484 aa24.29■■□□□ 1.48
SYNGR3-202ENST00000562045 ENPEPQ07075 957 aa24.29■■□□□ 1.48
SYNGR3-202ENST00000562045 APBB1IPQ7Z5R6 666 aaPredicted RBP24.29■■□□□ 1.48
SYNGR3-202ENST00000562045 ZMAT2Q96NC0 199 aaKnown RBP24.29■■□□□ 1.48
SYNGR3-202ENST00000562045 ACAP3Q96P50 834 aa24.29■■□□□ 1.48
SYNGR3-202ENST00000562045 MCCD1P59942 119 aaPredicted RBP24.28■■□□□ 1.48
SYNGR3-202ENST00000562045 NAB2Q15742 525 aa24.28■■□□□ 1.48
SYNGR3-202ENST00000562045 GPR153Q6NV75 609 aa24.28■■□□□ 1.48
SYNGR3-202ENST00000562045 SNX27Q96L92 541 aa24.28■■□□□ 1.48
SYNGR3-202ENST00000562045 MFSD14AQ96MC6 490 aa24.28■■□□□ 1.48
SYNGR3-202ENST00000562045 PRDM12Q9H4Q4 367 aa24.28■■□□□ 1.48
SYNGR3-202ENST00000562045 CPSF3Q9UKF6 684 aaKnown RBP24.28■■□□□ 1.48
SYNGR3-202ENST00000562045 ATG2AQ2TAZ0 1938 aa24.28■■□□□ 1.48
SYNGR3-202ENST00000562045 TMEM265A0A087WTH1 108 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 CTNNB1P35222 781 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 BMPR1AP36894 532 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 TRIM14Q14142 442 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 SYCP1Q15431 976 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 ENOX2Q16206 610 aaKnown RBP24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 SPOUT1Q5T280 376 aaKnown RBP24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 CCDC186Q7Z3E2 898 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 DEFB123Q8N688 67 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 COLGALT1Q8NBJ5 622 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 URGCPQ8TCY9 931 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 MRPL9Q9BYD2 267 aaKnown RBP24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 NT5C1B-RDH14C9J2C7 533 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 ZC3H11AO75152 810 aaKnown RBP eCLIP24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 WNT7BP56706 349 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 RNASELQ05823 741 aaKnown RBP24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 CYP24A1Q07973 514 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 XKR4Q5GH76 650 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 TMEM173Q86WV6 379 aaPredicted RBP24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 TMC2Q8TDI7 906 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 GDPD5Q8WTR4 605 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 RABGGTAQ92696 567 aa24.27■■□□□ 1.48
SYNGR3-202ENST00000562045 CLTAP09496 248 aa24.26■■□□□ 1.47
SYNGR3-202ENST00000562045 BCAR1P56945 870 aa24.26■■□□□ 1.47
SYNGR3-202ENST00000562045 TBX2Q13207 712 aaPredicted RBP24.26■■□□□ 1.47
SYNGR3-202ENST00000562045 PPFIBP1Q86W92 1011 aa24.26■■□□□ 1.47
SYNGR3-202ENST00000562045 PARD3BQ8TEW8 1205 aa24.26■■□□□ 1.47
SYNGR3-202ENST00000562045 PCMTD1Q96MG8 357 aaPredicted RBP24.26■■□□□ 1.47
SYNGR3-202ENST00000562045 RPS6KC1Q96S38 1066 aa24.26■■□□□ 1.47
SYNGR3-202ENST00000562045 PAAF1Q9BRP4 392 aa24.26■■□□□ 1.47
SYNGR3-202ENST00000562045 SMIM28A0A1B0GU29 152 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 GTPBP10A4D1E9 387 aaKnown RBP24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 F8W810 466 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 STX10O60499 249 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 TPM1P09493 284 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 TRIM49P0CI25 452 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 TRIM49CP0CI26 452 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 SLC11A1P49279 550 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 YARSP54577 528 aaKnown RBP24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 DSC1Q08554 894 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 HS1BP3Q53T59 392 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 COLGALT2Q8IYK4 626 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 BCL7CQ8WUZ0 217 aaPredicted RBP24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 IQCDQ96DY2 449 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 GUCD1Q96NT3 240 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 NUP58Q9BVL2 599 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 RBAKQ9NYW8 714 aaPredicted RBP24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 SIK3Q9Y2K2 1263 aa24.25■■□□□ 1.47
SYNGR3-202ENST00000562045 TTC26A0AVF1 554 aa24.24■■□□□ 1.47
SYNGR3-202ENST00000562045 C5orf67F2Z3F1 127 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms