RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 BRD1O95696 1058 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 PDGFBP01127 241 aaPredicted RBP10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 CLTAP09496 248 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 KCNE1P15382 129 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 FGFR3P22607 806 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 MCM4P33991 863 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 ZXDAP98168 799 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 PPP2R3AQ06190 1150 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 VARS2Q5ST30 1063 aaKnown RBP10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 ADALQ6DHV7 355 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 JADE1Q6IE81 842 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 LILRA6Q6PI73 481 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 GET4Q7L5D6 327 aaPredicted RBP10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 RSAD2Q8WXG1 361 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 ZNF707Q96C28 371 aaPredicted RBP10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 SAAL1Q96ER3 474 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 UROC1Q96N76 676 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 NECTIN4Q96NY8 510 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 MYADMQ96S97 322 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 BLZF1Q9H2G9 400 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 PCIF1Q9H4Z3 704 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 RPF1Q9H9Y2 349 aaKnown RBP10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 SLC38A7Q9NVC3 462 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 PANK4Q9NVE7 773 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 FNIP2Q9P278 1114 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 NR2E1Q9Y466 385 aa10.32□□□□□ -0.76
NSMCE1-203ENST00000562039 TTC26A0AVF1 554 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 TMEM221A6NGB7 291 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 M0R296 226 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 OGTO15294 1046 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 N4BP1O75113 896 aaKnown RBP10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 ZMYND10O75800 440 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 C8AP07357 584 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 NFICP08651 508 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 OR4Q2P0C623 313 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 ME1P48163 572 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 WNT7BP56706 349 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 GTF2BQ00403 316 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 ELAVL2Q12926 359 aaKnown RBP10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 PTPN21Q16825 1174 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 PPM1LQ5SGD2 360 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 LIN9Q5TKA1 542 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 TRIM67Q6ZTA4 783 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 ZNF720Q7Z2F6 126 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 GRASPQ7Z6J2 395 aaPredicted RBP10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 MAP4K3Q8IVH8 894 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 GRAMD1CQ8IYS0 662 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 SYCP3Q8IZU3 236 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 SLC7A14Q8TBB6 771 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 POMGNT1Q8WZA1 660 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 EDAQ92838 391 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 HCFC1R1Q9NWW0 138 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 KCNG1Q9UIX4 513 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 FBXW11Q9UKB1 542 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 AGO2Q9UKV8 859 aaKnown RBP10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 PCDHA7Q9UN72 937 aa10.31□□□□□ -0.76
NSMCE1-203ENST00000562039 A0A0B4J269 797 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 PRR33A8MZF0 331 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 TMEM189-UBE2V1I3L0A0 370 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 POLR2DO15514 142 aaKnown RBP10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 TRAPPC3O43617 180 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 NARSO43776 548 aaKnown RBP10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 FAM189A1O60320 539 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 CUTAO60888 179 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 PPP6R2O75170 966 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 PIGRP01833 764 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 AFMP43652 599 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 ASIC1P78348 528 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 ROR1Q01973 937 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 CTXN3Q4LDR2 81 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 AXDND1Q5T1B0 1012 aaPredicted RBP10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 SCARA3Q6AZY7 606 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 DSTYKQ6XUX3 929 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 ING5Q8WYH8 240 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 PBXIP1Q96AQ6 731 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 FAM213AQ9BRX8 229 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 PRKD2Q9BZL6 878 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 MTRRQ9UBK8 725 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 CPSF3Q9UKF6 684 aaKnown RBP10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 UBQLN1Q9UMX0 589 aaKnown RBP10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 ZDHHC9Q9Y397 364 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 MTCL1Q9Y4B5 1905 aaKnown RBP10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 CLUHO75153 1309 aa10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 PDCD11Q14690 1871 aaKnown RBP10.3□□□□□ -0.76
NSMCE1-203ENST00000562039 WDR27A2RRH5 827 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 SPTLC1O15269 473 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 PPP1R37O75864 691 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 SEC24AO95486 1093 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 YEATS4O95619 227 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 GAP43P17677 238 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 ADSSP30520 456 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 RPL9P32969 192 aaKnown RBP10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 CREMQ03060 361 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 RAB33AQ14088 237 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 E2F4Q16254 413 aa10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 L1TD1Q5T7N2 865 aaKnown RBP10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 LMBRD2Q68DH5 695 aaPredicted RBP10.29□□□□□ -0.76
NSMCE1-203ENST00000562039 ELMSAN1Q6PJG2 1045 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms