RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 LRRC37BQ96QE4 947 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 MXRA8Q9BRK3 442 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 FAM167BQ9BTA0 163 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 TDRD3Q9H7E2 651 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 ARHGEF10LQ9HCE6 1279 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 TMEM8AQ9HCN3 771 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 HAO1Q9UJM8 370 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 PHTF1Q9UMS5 762 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 ACTL7BQ9Y614 415 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 MROH7Q68CQ1 1323 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 SIPA1L1O43166 1804 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 SLC1A1P43005 524 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 POLGP54098 1239 aaPredicted RBP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 GTF2BQ00403 316 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 CENPCQ03188 943 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 ZYXQ15942 572 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 CAPRIN2Q6IMN6 1127 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 B3GNT9Q6UX72 402 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 MCOLN2Q8IZK6 566 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 ACER1Q8TDN7 264 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 IWS1Q96ST2 819 aa14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 MOV10L1Q9BXT6 1211 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-202ENST00000561976 POLRMTO00411 1230 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 PMM2O15305 246 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 GRIN3BO60391 1043 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 KRT15P19012 456 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 GPC3P51654 580 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 P3H1Q32P28 736 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 TMEM63BQ5T3F8 832 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 FAM102BQ5T8I3 360 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 PARD3BQ8TEW8 1205 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 SPOCK2Q92563 424 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 UTP4Q969X6 686 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 MRRFQ96E11 262 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 DDX27Q96GQ7 796 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 CSRNP1Q96S65 589 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 PI4K2AQ9BTU6 479 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 SAYSD1Q9NPB0 183 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 USTQ9Y2C2 406 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 USP20Q9Y2K6 914 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 USH1CQ9Y6N9 552 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 CCDC189A1A4V9 331 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 EIF4E1BA6NMX2 242 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 ATP5HO75947 161 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 ITGB5P18084 799 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 ALDH3A1P30838 453 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 HP1BP3Q5SSJ5 553 aaPredicted RBP14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 ZFYVE27Q5T4F4 411 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 TRIM68Q6AZZ1 485 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 ZNF449Q6P9G9 518 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 CAPN12Q6ZSI9 719 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 FAM81BQ96LP2 452 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 CFAP57Q96MR6 1250 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 SLCO1B3Q9NPD5 702 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 KCNH7Q9NS40 1196 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 EXOC7Q9UPT5 735 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 STARD13Q9Y3M8 1113 aa14.84□□□□□ -0.03
VPS9D1-202ENST00000561976 WFS1O76024 890 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 POTEJP0CG39 1038 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 SPARCL1Q14515 664 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 CCNG2Q16589 344 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 RIBC1Q8N443 379 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 KLRG2A4D1S0 409 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 LUC7L3O95232 432 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 ASMTLO95671 621 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 CD58P19256 250 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 ADSSP30520 456 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 YWHABP31946 246 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 NSFP46459 744 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 QARSP47897 775 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 PODNQ7Z5L7 613 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 AGGF1Q8N302 714 aaeCLIP14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 CHURC1Q8WUH1 139 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 TMEM174Q8WUU8 243 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 MAML1Q92585 1016 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 KIFC3Q9BVG8 833 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 OSBPL8Q9BZF1 889 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 TRABDQ9H4I3 376 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 NKX1-2Q9UD57 310 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 CHKBQ9Y259 395 aa14.83□□□□□ -0.04
VPS9D1-202ENST00000561976 LTBP1Q14766 1721 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 CNGA1P29973 690 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 PEX19P40855 299 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 YARSP54577 528 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 SNRPFP62306 86 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 RNASELQ05823 741 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 PARP6Q2NL67 630 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 NAIF1Q69YI7 327 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 SV2AQ7L0J3 742 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 TRABD2AQ86V40 505 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 C4orf33Q8N1A6 199 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 LRRC8CQ8TDW0 803 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 NAF1Q96HR8 494 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 SMC6Q96SB8 1091 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 LRMDAQ9H2I8 198 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 KIF9Q9HAQ2 790 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 COQ4Q9Y3A0 265 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 DCTN3O75935 186 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms