RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 BOLA2-SMG1P6H3BVE0 249 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 FOXN2P32314 431 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 C9orf131Q5VYM1 1079 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 TRIM67Q6ZTA4 783 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 SV2BQ7L1I2 683 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 MYOCDQ8IZQ8 938 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 HNRNPABQ99729 332 aaKnown RBP19.76■□□□□ 0.75
RAB40C-206ENST00000561781 EIF2AQ9BY44 585 aaKnown RBP19.76■□□□□ 0.75
RAB40C-206ENST00000561781 BHMT2Q9H2M3 363 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 ATP8B3O60423 1300 aa19.76■□□□□ 0.75
RAB40C-206ENST00000561781 TMEM110-MUSTN1A8MSY1 372 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 MAGEB3O15480 346 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 NMT2O60551 498 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 PDE5AO76074 875 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 SNX27Q96L92 541 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 DNAJB4Q9UDY4 337 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 COL1A1P02452 1464 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-206ENST00000561781 NPHP3-ACAD11A0A0J9YXS1 232 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 FOXO6A8MYZ6 492 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 TRAF5O00463 557 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 EXOC3O60645 756 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 RAD17O75943 681 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 TECP42680 631 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 HNRNPDQ14103 355 aaKnown RBP19.75■□□□□ 0.75
RAB40C-206ENST00000561781 EAPPQ56P03 285 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-206ENST00000561781 HSP90AA5PQ58FG0 334 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 LRRC8BQ6P9F7 803 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 AMFRQ9UKV5 643 aa19.75■□□□□ 0.75
RAB40C-206ENST00000561781 A0A0A6YYK5 440 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-206ENST00000561781 PVALEFA0A1B0GWK0 134 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 GYG2O15488 501 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 GTF2H1P32780 548 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 GRIA2P42262 883 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 RPL21P46778 160 aaKnown RBP19.74■□□□□ 0.75
RAB40C-206ENST00000561781 NPEPPSP55786 919 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 FKBP3Q00688 224 aaKnown RBP19.74■□□□□ 0.75
RAB40C-206ENST00000561781 C10orf82Q8WW14 230 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 ADGRA3Q8IWK6 1321 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 LSM1O15116 133 aaKnown RBP19.74■□□□□ 0.75
RAB40C-206ENST00000561781 OR52Z1P0C646 297 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 HALP42357 657 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 PPP2R5CQ13362 524 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 C1orf228Q6PIY5 440 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 PASD1Q8IV76 773 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 CROCCP3Q8IVE0 287 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 VPS52Q8N1B4 723 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 ARHGAP24Q8N264 748 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 SPZ1Q9BXG8 430 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 RIC8AQ9NPQ8 531 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 PPP1R9AQ9ULJ8 1098 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 ACTL7BQ9Y614 415 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 WASF2Q9Y6W5 498 aa19.74■□□□□ 0.75
RAB40C-206ENST00000561781 F8W8V4 182 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 OR6B1O95007 311 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 HIBADHP31937 336 aaKnown RBP19.73■□□□□ 0.75
RAB40C-206ENST00000561781 MED21Q13503 144 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 RRP1BQ14684 758 aaKnown RBP19.73■□□□□ 0.75
RAB40C-206ENST00000561781 KLHL35Q6PF15 583 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 RGS9BPQ6ZS82 235 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 FADS3Q9Y5Q0 445 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 SCN9AQ15858 1988 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 G3V3G9 751 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 NDC80O14777 642 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 VILLO15195 856 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 CBFA2T3O75081 653 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 KRT38O76015 456 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 TTLL1O95922 423 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 ACTN1P12814 892 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 KRT13P13646 458 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 LMNB1P20700 586 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 CDC16Q13042 620 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 DCAF8Q5TAQ9 597 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 CLNKQ7Z7G1 428 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 ADGRA1Q86SQ6 560 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 C18orf8Q96DM3 657 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 CALML4Q96GE6 196 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 CD209Q9NNX6 404 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 BLOC1S4Q9NUP1 217 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 NDE1Q9NXR1 346 aa19.73■□□□□ 0.75
RAB40C-206ENST00000561781 SAP30BPQ9UHR5 308 aaKnown RBP19.73■□□□□ 0.75
RAB40C-206ENST00000561781 E9PBE3 544 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 C2CD2LO14523 706 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 DDX3YO15523 660 aaKnown RBP19.72■□□□□ 0.75
RAB40C-206ENST00000561781 GRIN3BO60391 1043 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 ANPEPP15144 967 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 VPS41P49754 854 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 ZNF211Q13398 564 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-206ENST00000561781 THOC5Q13769 683 aaKnown RBP19.72■□□□□ 0.75
RAB40C-206ENST00000561781 BCL2A1Q16548 175 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 CTC1Q2NKJ3 1217 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 BBS5Q8N3I7 341 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 CEP70Q8NHQ1 597 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 EYA3Q99504 573 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 EMILIN3Q9NT22 766 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 ZDHHC7Q9NXF8 308 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 ZNF541Q9H0D2 1346 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 H2AFZP0C0S5 128 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 ARFIP2P53365 341 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 H2AFVQ71UI9 128 aa19.72■□□□□ 0.75
RAB40C-206ENST00000561781 TREML1Q86YW5 311 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms