RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 SYN3O14994 580 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 SPTLC1O15269 473 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 MEFVO15553 781 aaPredicted RBP9.22□□□□□ -0.93
PALB2-202ENST00000561514 TRAPPC3O43617 180 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 MCF2P10911 925 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 KCNE1P15382 129 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 FCARP24071 287 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 U2AF2P26368 475 aaKnown RBP eCLIP9.22□□□□□ -0.93
PALB2-202ENST00000561514 TKTP29401 623 aaKnown RBP9.22□□□□□ -0.93
PALB2-202ENST00000561514 RPS9P46781 194 aaKnown RBP9.22□□□□□ -0.93
PALB2-202ENST00000561514 NPTX2P47972 431 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 CLCNKBP51801 687 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 NEK4P51957 841 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 ROR1Q01973 937 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 MAPK7Q13164 816 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 SLC5A9Q2M3M2 681 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 SLC44A4Q53GD3 710 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 GLRA4Q5JXX5 417 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 PRSS36Q5K4E3 855 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 TTC38Q5R3I4 469 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 MAMSTRQ6ZN01 415 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 CEP57Q86XR8 500 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 TCEAL8Q8IYN2 117 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 CEP120Q8N960 986 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 ZBTB44Q8NCP5 570 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 ZNF461Q8TAF7 563 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 DNASE1L2Q92874 299 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 FAM212AQ96EL1 285 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 IFT74Q96LB3 600 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 BHMT2Q9H2M3 363 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 C17orf75Q9HAS0 396 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 PRMT8Q9NR22 394 aaPredicted RBP9.22□□□□□ -0.93
PALB2-202ENST00000561514 TOPORSQ9NS56 1045 aaPredicted RBP9.22□□□□□ -0.93
PALB2-202ENST00000561514 SLC38A7Q9NVC3 462 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 HCFC1R1Q9NWW0 138 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 DLL3Q9NYJ7 618 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 MAFFQ9ULX9 164 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 GDAQ9Y2T3 454 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 STK24Q9Y6E0 443 aa9.22□□□□□ -0.93
PALB2-202ENST00000561514 FRYLO94915 3013 aa9.21□□□□□ -0.93
PALB2-202ENST00000561514 WDR27A2RRH5 827 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 LILRB5O75023 590 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 LRRN2O75325 713 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 RHOP08100 348 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 TDGF1P13385 188 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 ATF2P15336 505 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 PTMSP20962 102 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 RFX1P22670 979 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 RPL9P32969 192 aaKnown RBP9.21□□□□□ -0.94
PALB2-202ENST00000561514 EPHA5P54756 1037 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 HMGN5P82970 282 aaKnown RBP9.21□□□□□ -0.94
PALB2-202ENST00000561514 FZD5Q13467 585 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 SNW1Q13573 536 aaKnown RBP9.21□□□□□ -0.94
PALB2-202ENST00000561514 ZNF174Q15697 407 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 TPGS2Q68CL5 300 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 KCTD17Q8N5Z5 321 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 SPIRE2Q8WWL2 714 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 RUBCNQ92622 972 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 ELSPBP1Q96BH3 223 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 RMDN1Q96DB5 314 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 C8orf76Q96K31 380 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 ZMAT2Q96NC0 199 aaKnown RBP9.21□□□□□ -0.94
PALB2-202ENST00000561514 NELL2Q99435 816 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 NTPCRQ9BSD7 190 aaKnown RBP9.21□□□□□ -0.94
PALB2-202ENST00000561514 TIPINQ9BVW5 301 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 BCO2Q9BYV7 579 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 GOLGA2P5Q9HBQ8 144 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 TRPV5Q9NQA5 729 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 LRWD1Q9UFC0 647 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 LIMCH1Q9UPQ0 1083 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 PCDHGA2Q9Y5H1 932 aa9.21□□□□□ -0.94
PALB2-202ENST00000561514 K7ERI5 159 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 STK25O00506 426 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 LAD1O00515 517 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 PODXLO00592 558 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 CEBPBP17676 345 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 GUCY2CP25092 1073 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 TARSP26639 723 aaKnown RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 CCT6AP40227 531 aaKnown RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 PRPHP41219 470 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 BRCC3P46736 316 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 TOB1P50616 345 aaPredicted RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 FOSBP53539 338 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 GUCY1B3Q02153 619 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 ZNF568Q3ZCX4 644 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 SPECC1Q5M775 1068 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 VARS2Q5ST30 1063 aaKnown RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 HYIQ5T013 277 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 MPZL3Q6UWV2 235 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 C1orf186Q6ZWK4 172 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 BEST2Q8NFU1 509 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 SNX29Q8TEQ0 813 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 SUSD3Q96L08 255 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 DRC1Q96MC2 740 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 KXD1Q9BQD3 176 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 IER2Q9BTL4 223 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 MMTAG2Q9BU76 263 aaKnown RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 RUSC1Q9BVN2 902 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 CCDC94Q9BW85 323 aaPredicted RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 MRPL4Q9BYD3 311 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms