RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 GTF3C4Q9UKN8 822 aa17.41■□□□□ 0.38
AP4E1-205ENST00000561393 ZNF862O60290 1169 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 CHRNA3P32297 505 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 PLA2G4AP47712 749 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 IFNAR2P48551 515 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 CCDC121Q6ZUS5 278 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 ARMCX2Q7L311 632 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 ANKS4BQ8N8V4 417 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 NRAPQ86VF7 1730 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 A0A087WZ62 844 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 FRMD3A2A2Y4 597 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 A6NNZ2 444 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 POC1B-GALNT4F8VUJ3 575 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 PJA2O43164 708 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 PRPSAP2O60256 369 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 LMNB2Q03252 620 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 TUBB8Q3ZCM7 444 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 IRF2BP2Q7Z5L9 587 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 CYFIP2Q96F07 1278 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 SENP7Q9BQF6 1050 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 FDXACB1Q9BRP7 624 aaPredicted RBP17.4■□□□□ 0.38
AP4E1-205ENST00000561393 PARVAQ9NVD7 372 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 TAS2R14Q9NYV8 317 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 L1RE1Q9UN81 338 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 COL4A1P02462 1669 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 CHD4Q14839 1912 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 ZSCAN5CA6NGD5 496 aaPredicted RBP17.4■□□□□ 0.38
AP4E1-205ENST00000561393 GLRA2P23416 452 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 ADORA2AP29274 412 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 KIZQ2M2Z5 673 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 PPP6R3Q5H9R7 873 aaPredicted RBP17.4■□□□□ 0.38
AP4E1-205ENST00000561393 CREG2Q8IUH2 290 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 PALM2Q8IXS6 379 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 MICALL1Q8N3F8 863 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 CCDC63Q8NA47 563 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 SYT17Q9BSW7 474 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 TXNDC16Q9P2K2 825 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 TBK1Q9UHD2 729 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 FBXL5Q9UKA1 691 aa17.4■□□□□ 0.38
AP4E1-205ENST00000561393 A6NJR5 290 aa17.39■□□□□ 0.38
AP4E1-205ENST00000561393 ADCY3O60266 1144 aa17.39■□□□□ 0.38
AP4E1-205ENST00000561393 MYL6P60660 151 aa17.39■□□□□ 0.38
AP4E1-205ENST00000561393 FAM102AQ5T9C2 384 aaPredicted RBP17.39■□□□□ 0.38
AP4E1-205ENST00000561393 GPAT2Q6NUI2 795 aa17.39■□□□□ 0.38
AP4E1-205ENST00000561393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.39■□□□□ 0.38
AP4E1-205ENST00000561393 BTBD7Q9P203 1132 aa17.39■□□□□ 0.38
AP4E1-205ENST00000561393 AFG3L2Q9Y4W6 797 aa17.39■□□□□ 0.38
AP4E1-205ENST00000561393 NHSQ6T4R5 1651 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 MYBL1P10243 752 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 CYP2C9P11712 490 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 RRM1P23921 792 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 TMEM132DQ14C87 1099 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 ACAD10Q6JQN1 1059 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 SLC9A9Q8IVB4 645 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 BEST2Q8NFU1 509 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 ARHGEF26Q96DR7 871 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 CABS1Q96KC9 395 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 H3BRB1 525 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 LYPLA2O95372 231 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 ITGB3P05106 788 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 NR1D1P20393 614 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 CCT5P48643 541 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 HGSNATQ68CP4 663 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 USP50Q70EL3 339 aaPredicted RBP17.39■□□□□ 0.37
AP4E1-205ENST00000561393 BBOF1Q8ND07 529 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 MORC4Q8TE76 937 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 PPP1R13LQ8WUF5 828 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 HNRNPLLQ8WVV9 542 aaKnown RBP17.39■□□□□ 0.37
AP4E1-205ENST00000561393 PORCNQ9H237 461 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 TUT1Q9H6E5 874 aaKnown RBP17.39■□□□□ 0.37
AP4E1-205ENST00000561393 LRRC4Q9HBW1 653 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 IP6K2Q9UHH9 426 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 STRIP2Q9ULQ0 834 aa17.39■□□□□ 0.37
AP4E1-205ENST00000561393 TNRC6CQ9HCJ0 1690 aaKnown RBP17.39■□□□□ 0.37
AP4E1-205ENST00000561393 GAS2O43903 313 aaKnown RBP17.38■□□□□ 0.37
AP4E1-205ENST00000561393 KCNA2P16389 499 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 PRKCIP41743 596 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 BASP1P80723 227 aaKnown RBP17.38■□□□□ 0.37
AP4E1-205ENST00000561393 DMTNQ08495 405 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 PDCLQ13371 301 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 EPM2AIP1Q7L775 607 aaPredicted RBP17.38■□□□□ 0.37
AP4E1-205ENST00000561393 MCEEQ96PE7 176 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 CARD9Q9H257 536 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 PCDHA2Q9Y5H9 948 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 ZNF131P52739 623 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 PPP2R5DQ14738 602 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 DGKDQ16760 1214 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 NOP9Q86U38 636 aaKnown RBP17.38■□□□□ 0.37
AP4E1-205ENST00000561393 DAW1Q8N136 415 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 C1orf131Q8NDD1 294 aaKnown RBP17.38■□□□□ 0.37
AP4E1-205ENST00000561393 GTF3C2Q8WUA4 911 aaPredicted RBP17.38■□□□□ 0.37
AP4E1-205ENST00000561393 BSNDQ8WZ55 320 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 RBM41Q96IZ5 413 aaKnown RBP17.38■□□□□ 0.37
AP4E1-205ENST00000561393 HOMER3Q9NSC5 361 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 MYPNQ86TC9 1320 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 A8MXQ7 604 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 TJP3O95049 919 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 CTSHP09668 335 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 KRT3P12035 628 aa17.38■□□□□ 0.37
AP4E1-205ENST00000561393 HSDL1Q3SXM5 330 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms