RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 SPAG1Q07617 926 aa29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 NOLC1Q14978 699 aaKnown RBP eCLIP29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 FOXQ1Q9C009 403 aa29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 CNTN3Q9P232 1028 aa29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 TUBGCP4Q9UGJ1 667 aa29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 BACE2Q9Y5Z0 518 aa29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 NOTCH4Q99466 2003 aa29.59■■■□□ 2.33
SNRPA1-215ENST00000561187 PLA2G4BP0C869 781 aa29.58■■■□□ 2.33
SNRPA1-215ENST00000561187 GPC5P78333 572 aa29.58■■■□□ 2.33
SNRPA1-215ENST00000561187 DHX8Q14562 1220 aaKnown RBP29.58■■■□□ 2.33
SNRPA1-215ENST00000561187 TMEM161BQ8NDZ6 487 aa29.58■■■□□ 2.33
SNRPA1-215ENST00000561187 WDR27A2RRH5 827 aa29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 PROB1E7EW31 1015 aa29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 SLC12A3P55017 1021 aa29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 HYIQ5T013 277 aa29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 NPAS3Q8IXF0 933 aa29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 SYT2Q8N9I0 419 aaPredicted RBP29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 BICD1Q96G01 975 aa29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 C17orf75Q9HAS0 396 aa29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 MRPS23Q9Y3D9 190 aaKnown RBP29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 ZFP37Q9Y6Q3 630 aaPredicted RBP29.57■■■□□ 2.32
SNRPA1-215ENST00000561187 FAM186AA6NE01 2351 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 PRRG1O14668 218 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 LRRN2O75325 713 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 CXCL8P10145 99 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 MAPTP10636 758 aaKnown RBP29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 KCNE1P15382 129 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 MCM4P33991 863 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 SLC5A9Q2M3M2 681 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 TMEM119Q4V9L6 283 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 SPIRE2Q8WWL2 714 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 NKD2Q969F2 451 aaPredicted RBP29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 TIPINQ9BVW5 301 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 SLC2A4RGQ9NR83 387 aa29.56■■■□□ 2.32
SNRPA1-215ENST00000561187 PDCD11Q14690 1871 aaKnown RBP29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 TOM1L1O75674 476 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 LRG1P02750 347 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 RHOP08100 348 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 SMTNP53814 917 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 SNW1Q13573 536 aaKnown RBP29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 UVSSAQ2YD98 709 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 SLC10A6Q3KNW5 377 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 MTSS1LQ765P7 747 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 MCRS1Q96EZ8 462 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 HAPLN2Q9GZV7 340 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 SMC3Q9UQE7 1217 aa29.55■■■□□ 2.32
SNRPA1-215ENST00000561187 CEBPBP17676 345 aa29.54■■■□□ 2.32
SNRPA1-215ENST00000561187 ELF1P32519 619 aa29.54■■■□□ 2.32
SNRPA1-215ENST00000561187 LRRC15Q8TF66 581 aa29.54■■■□□ 2.32
SNRPA1-215ENST00000561187 CYP4F11Q9HBI6 524 aa29.54■■■□□ 2.32
SNRPA1-215ENST00000561187 FBXL5Q9UKA1 691 aa29.54■■■□□ 2.32
SNRPA1-215ENST00000561187 CTXN3Q4LDR2 81 aa29.53■■■□□ 2.32
SNRPA1-215ENST00000561187 SLC8B1Q6J4K2 584 aa29.53■■■□□ 2.32
SNRPA1-215ENST00000561187 GPBP1Q86WP2 473 aa29.53■■■□□ 2.32
SNRPA1-215ENST00000561187 TBC1D32Q96NH3 1257 aa29.53■■■□□ 2.32
SNRPA1-215ENST00000561187 SIT1Q9Y3P8 196 aa29.53■■■□□ 2.32
SNRPA1-215ENST00000561187 SYN3O14994 580 aa29.52■■■□□ 2.32
SNRPA1-215ENST00000561187 CLDN3O15551 220 aa29.52■■■□□ 2.32
SNRPA1-215ENST00000561187 SEC24AO95486 1093 aa29.52■■■□□ 2.32
SNRPA1-215ENST00000561187 TNFSF9P41273 254 aa29.52■■■□□ 2.32
SNRPA1-215ENST00000561187 ARSHQ5FYA8 562 aa29.52■■■□□ 2.32
SNRPA1-215ENST00000561187 CORO1BQ9BR76 489 aa29.52■■■□□ 2.32
SNRPA1-215ENST00000561187 REEP2Q9BRK0 252 aa29.52■■■□□ 2.32
SNRPA1-215ENST00000561187 NTPCRQ9BSD7 190 aaKnown RBP29.52■■■□□ 2.32
SNRPA1-215ENST00000561187 K7ENM7 598 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 POU2F2P09086 479 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 RPL9P32969 192 aaKnown RBP29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 GUCY2FP51841 1108 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 GRIN1Q05586 938 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 MCL1Q07820 350 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 ZBTB41Q5SVQ8 909 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 POTEHQ6S545 545 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 RASSF8Q8NHQ8 419 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 ZNF461Q8TAF7 563 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 TCEAL4Q96EI5 215 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 KIF12Q96FN5 646 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 R4GN57 208 aa29.51■■■□□ 2.31
SNRPA1-215ENST00000561187 H7C4K7 107 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 GLULP15104 373 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 ARL6IP4Q66PJ3 421 aaKnown RBP29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 ZNF280DQ6N043 979 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 PHLDB3Q6NSJ2 640 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 ZPBP2Q6X784 338 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 PJA1Q8NG27 643 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 SUSD3Q96L08 255 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 ZHX3Q9H4I2 956 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 UPF2Q9HAU5 1272 aaKnown RBP29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 KCNH3Q9ULD8 1083 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 TIMM13Q9Y5L4 95 aaPredicted RBP29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 INSL5Q9Y5Q6 135 aa29.5■■■□□ 2.31
SNRPA1-215ENST00000561187 NRG2O14511 850 aaPredicted RBP29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 ABLIM3O94929 683 aa29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 CPB1P15086 417 aa29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 CD72P21854 359 aa29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 LIG4P49917 911 aa29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 NCKAP1LP55160 1127 aa29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 UBXN2BQ14CS0 331 aa29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 MLF2Q15773 248 aaPredicted RBP29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 LARP1BQ659C4 914 aaKnown RBP29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 HAUS6Q7Z4H7 955 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms