RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 SMC2O95347 1197 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 GARTP22102 1010 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 ADSSP30520 456 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 GLUD2P49448 558 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 CYP2J2P51589 502 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 FAM160A1Q05DH4 1040 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 ELAVL2Q12926 359 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 TMEM132DQ14C87 1099 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 NAB2Q15742 525 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 DUSP6Q16828 381 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 UPP1Q16831 310 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 PUS10Q3MIT2 529 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 XKR4Q5GH76 650 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 JADE1Q6IE81 842 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 PALB2Q86YC2 1186 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 FMR1NBQ8N0W7 255 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 GPD1LQ8N335 351 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 EFHBQ8N7U6 833 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 CACTINQ8WUQ7 758 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 B3GALT6Q96L58 329 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 KLHL5Q96PQ7 755 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 HERC2P3Q9BVR0 1158 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 MARCH5Q9NX47 278 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 CPSF3Q9UKF6 684 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 UBQLN1Q9UMX0 589 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 FAM50BQ9Y247 325 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 R3HCC1Q9Y3T6 440 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 STYXL1Q9Y6J8 313 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 PRUNE2Q8WUY3 3088 aa9.8□□□□□ -0.84
SNRPA1-214ENST00000560987 SF3B1O75533 1304 aaKnown RBP eCLIP9.8□□□□□ -0.847e-7■■■■■ 63.2
SNRPA1-214ENST00000560987 CITO14578 2027 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 TRANK1O15050 2925 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 I3L4J1 428 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 KIAA0391O15091 583 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 KLRC4O43908 158 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 KIF4AO95239 1232 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 IL18RAPO95256 599 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 CNPP09543 421 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 SPATA31D3P0C874 917 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 MCM4P33991 863 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 BRCC3P46736 316 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 KCNQ1P51787 676 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 RBM10P98175 930 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 TFAMQ00059 246 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 SOX4Q06945 474 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 DPYDQ12882 1025 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 STK4Q13043 487 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 PNOCQ13519 176 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 KNOP1Q1ED39 458 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 PRSS55Q6UWB4 352 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 DSTYKQ6XUX3 929 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 SPATA31D4Q6ZUB0 917 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 PPFIBP1Q86W92 1011 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 SCFD1Q8WVM8 642 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 TSPAN18Q96SJ8 248 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 CBWD1Q9BRT8 395 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 TTPALQ9BTX7 342 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 APOL5Q9BWW9 433 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 VN1R3Q9BXE9 311 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 ASB7Q9H672 318 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 KIAA1586Q9HCI6 787 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 DPP3Q9NY33 737 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 RBAKQ9NYW8 714 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 HSPBP1Q9NZL4 362 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 TUBGCP4Q9UGJ1 667 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 CD207Q9UJ71 328 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 BARX2Q9UMQ3 279 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 MAPK8IP1Q9UQF2 711 aa9.79□□□□□ -0.84
SNRPA1-214ENST00000560987 MEFVO15553 781 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 EXOC3O60645 756 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 ADH1AP07327 375 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 RPL17P18621 184 aaKnown RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 IGFBP6P24592 240 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 HOXD13P35453 343 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 GUCY2FP51841 1108 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 ARPP19P56211 112 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 SNRPFP62306 86 aaKnown RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 DSG1Q02413 1049 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 DLX2Q07687 328 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 SNW1Q13573 536 aaKnown RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 PTPN14Q15678 1187 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 CTC1Q2NKJ3 1217 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 LEXMQ3ZCV2 418 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 KIAA0319Q5VV43 1072 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 ISM2Q6H9L7 571 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 PTCRAQ6ISU1 281 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 PDXDC1Q6P996 788 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 CRELD2Q6UXH1 353 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 EPM2AIP1Q7L775 607 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 CSGALNACT2Q8N6G5 542 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 ZSWIM2Q8NEG5 633 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 CASP10Q92851 521 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 SMARCE1Q969G3 411 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 PDE11AQ9HCR9 933 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 TSHZ2Q9NRE2 1034 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 RMND1Q9NWS8 449 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 CGNQ9P2M7 1197 aaKnown RBP9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 DERAQ9Y315 318 aa9.78□□□□□ -0.84
SNRPA1-214ENST00000560987 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms