RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 FOXN3O00409 490 aaPredicted RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 ZNF263O14978 683 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 GPR182O15218 404 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 MGEA5O60502 916 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 RECQL4O94761 1208 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 NDUFA10O95299 355 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 MYCP01106 439 aaPredicted RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 PNMA6AP0CW24 399 aaPredicted RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 GHRP10912 638 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 FERP16591 822 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 ACO1P21399 889 aaKnown RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 CD52P31358 61 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 EIF4A3P38919 411 aaKnown RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 PIK3CAP42336 1068 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 BIRC3Q13489 604 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 NCOA4Q13772 614 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 GPNMBQ14956 572 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 ASIC2Q16515 512 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 C1orf53Q5VUE5 145 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 MRPL10Q7Z7H8 261 aaKnown RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 FAM71AQ8IYT1 594 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 CCDC170Q8IYT3 715 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 TMEM130Q8N3G9 435 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 C1orf127Q8N9H9 656 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 USP38Q8NB14 1042 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 ELMO3Q96BJ8 720 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 ZMAT2Q96NC0 199 aaKnown RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 SPAG5Q96R06 1193 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 EIF3CQ99613 913 aaKnown RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 NHEJ1Q9H9Q4 299 aaPredicted RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 UBE2TQ9NPD8 197 aaPredicted RBP12.17□□□□□ -0.46
SNX1-212ENST00000560861 PADI3Q9ULW8 664 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 PPP2R2CQ9Y2T4 447 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 HES2Q9Y543 173 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 IPPQ9Y573 584 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 NUB1Q9Y5A7 615 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 TET1Q8NFU7 2136 aa12.17□□□□□ -0.46
SNX1-212ENST00000560861 ZNF623O75123 536 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 STAU1O95793 577 aaKnown RBP12.16□□□□□ -0.46
SNX1-212ENST00000560861 TNNC2P02585 160 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 TMEM191BP0C7N4 346 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 KCNE1P15382 129 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 ANXA13P27216 316 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 MYL6P60660 151 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 NOP14P78316 857 aaKnown RBP12.16□□□□□ -0.46
SNX1-212ENST00000560861 TFAMQ00059 246 aaKnown RBP12.16□□□□□ -0.46
SNX1-212ENST00000560861 TSR1Q2NL82 804 aaKnown RBP12.16□□□□□ -0.46
SNX1-212ENST00000560861 SPOPLQ6IQ16 392 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 ENOSF1Q7L5Y1 443 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 ANKRD33Q7Z3H0 272 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 ZNF571Q7Z3V5 609 aaPredicted RBP12.16□□□□□ -0.46
SNX1-212ENST00000560861 GPIHBP1Q8IV16 184 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 ACRBPQ8NEB7 543 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 CAGE1Q8TC20 777 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 JAKMIP2Q96AA8 810 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 ANKRD36BP1Q96IX9 119 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 PPP1R13BQ96KQ4 1090 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 FAM81BQ96LP2 452 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 TSPAN18Q96SJ8 248 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 VRTNQ9H8Y1 702 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 CNTN6Q9UQ52 1028 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 SCN5AQ14524 2016 aa12.16□□□□□ -0.46
SNX1-212ENST00000560861 A0A0U1RQJ8 604 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 EVI5O60447 810 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 GFPT2O94808 682 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 SELPP16109 830 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 ATF7P17544 494 aaPredicted RBP12.15□□□□□ -0.46
SNX1-212ENST00000560861 CYLC1P35663 651 aaPredicted RBP12.15□□□□□ -0.46
SNX1-212ENST00000560861 ARHGAP25P42331 645 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 GJA8P48165 433 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 KIF11P52732 1056 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 MFAP3P55082 362 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 PTK2Q05397 1052 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 KLHL30Q0D2K2 578 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 PAK2Q13177 524 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 CUL2Q13617 745 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 TMEM132DQ14C87 1099 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 ARHGAP44Q17R89 818 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 SLC39A5Q6ZMH5 540 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 ZNF662Q6ZS27 426 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 NYAP1Q6ZVC0 841 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 PPM1KQ8N3J5 372 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 ANKLE1Q8NAG6 615 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 SLC30A5Q8TAD4 765 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 ATRIPQ8WXE1 791 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 TAF4BQ92750 862 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 FAXDC2Q96IV6 333 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 TOX2Q96NM4 488 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 ARID3AQ99856 593 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 HAUS4Q9H6D7 363 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 C1orf112Q9NSG2 853 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 FAM105AQ9NUU6 356 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 PCDHB2Q9Y5E7 798 aa12.15□□□□□ -0.46
SNX1-212ENST00000560861 BZW2Q9Y6E2 419 aaKnown RBP12.15□□□□□ -0.46
SNX1-212ENST00000560861 MEIS3P2A8K0S8 358 aa12.14□□□□□ -0.47
SNX1-212ENST00000560861 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
SNX1-212ENST00000560861 PTGESO14684 152 aa12.14□□□□□ -0.47
SNX1-212ENST00000560861 PHACTR2O75167 634 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms