RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 COLEC11Q9BWP8 271 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 KLF16Q9BXK1 252 aaPredicted RBP8.73□□□□□ -1.01
LRRC28-219ENST00000560483 CDT1Q9H211 546 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 TLE6Q9H808 572 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 PRDM6Q9NQX0 595 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 EXOC1Q9NV70 894 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 SEL1LQ9UBV2 794 aa8.73□□□□□ -1.01
LRRC28-219ENST00000560483 COL4A6Q14031 1691 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 NRP1O14786 923 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 PER2O15055 1255 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 DDHD2O94830 711 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 PRPF6O94906 941 aaKnown RBP8.72□□□□□ -1.01
LRRC28-219ENST00000560483 CXCL14O95715 111 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 URODP06132 367 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 GALTP07902 379 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 VSIG8P0DPA2 414 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 MYBP10242 640 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 NDUFV2P19404 249 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 SCP2P22307 547 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 KCNA5P22460 613 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 CASP1P29466 404 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 IRS1P35568 1242 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 ZNF131P52739 623 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 UBE3AQ05086 875 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 PPP2R3AQ06190 1150 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 SMC1AQ14683 1233 aaKnown RBP8.72□□□□□ -1.01
LRRC28-219ENST00000560483 CLUL1Q15846 466 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 AAK1Q2M2I8 961 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 SLFN12LQ6IEE8 588 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 ZPBP2Q6X784 338 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 TAS1R3Q7RTX0 852 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 CEP57Q86XR8 500 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 SLC39A11Q8N1S5 342 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 CEP120Q8N960 986 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 IGSF21Q96ID5 467 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 TMEM175Q9BSA9 504 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 NTPCRQ9BSD7 190 aaKnown RBP8.72□□□□□ -1.01
LRRC28-219ENST00000560483 TRIM9Q9C026 710 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 RPF1Q9H9Y2 349 aaKnown RBP8.72□□□□□ -1.01
LRRC28-219ENST00000560483 MIOSQ9NXC5 875 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 CHMP5Q9NZZ3 219 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 PCDHGC5Q9Y5F6 944 aa8.72□□□□□ -1.01
LRRC28-219ENST00000560483 SLFN14P0C7P3 912 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 CXCL8P10145 99 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 DNAJB1P25685 340 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 GRM5P41594 1212 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 NDUFA8P51970 172 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 ERVFC1P60507 584 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 GTF2BQ00403 316 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 PLCB3Q01970 1234 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 SPAG1Q07617 926 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 TUSC3Q13454 348 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 CUL4BQ13620 913 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 ALCAMQ13740 583 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 KYAT1Q16773 422 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 FAM26FQ5R3K3 315 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 ARMCX5Q6P1M9 558 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 ZNF720Q7Z2F6 126 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 TMEM173Q86WV6 379 aaPredicted RBP8.71□□□□□ -1.02
LRRC28-219ENST00000560483 GLYCTKQ8IVS8 523 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 NELFCDQ8IXH7 590 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 COLGALT2Q8IYK4 626 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 ZNF511Q8NB15 262 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 AUTS2Q8WXX7 1259 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 HPS3Q969F9 1004 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 HVCN1Q96D96 273 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 DNAJC19Q96DA6 116 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 PCIF1Q9H4Z3 704 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 TMEM206Q9H813 350 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 ZFAND3Q9H8U3 227 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 SLC39A2Q9NP94 309 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 NGRNQ9NPE2 291 aaKnown RBP8.71□□□□□ -1.02
LRRC28-219ENST00000560483 MRPL17Q9NRX2 175 aaKnown RBP8.71□□□□□ -1.02
LRRC28-219ENST00000560483 SLC38A7Q9NVC3 462 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 KBTBD4Q9NVX7 518 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 CACNG4Q9UBN1 327 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 USP25Q9UHP3 1055 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 HOOK1Q9UJC3 728 aaKnown RBP8.71□□□□□ -1.02
LRRC28-219ENST00000560483 AGO2Q9UKV8 859 aaKnown RBP8.71□□□□□ -1.02
LRRC28-219ENST00000560483 COG5Q9UP83 839 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 R3HCC1Q9Y3T6 440 aaKnown RBP8.71□□□□□ -1.02
LRRC28-219ENST00000560483 NUB1Q9Y5A7 615 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 TRANK1O15050 2925 aa8.71□□□□□ -1.02
LRRC28-219ENST00000560483 H3BQ06 376 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-219ENST00000560483 OGTO15294 1046 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 XPOTO43592 962 aaKnown RBP8.7□□□□□ -1.02
LRRC28-219ENST00000560483 NCK2O43639 380 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 B3GAT3O94766 335 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 ZNF202O95125 648 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 CLTAP09496 248 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 LINC00271P0C7V0 271 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 KLRC2P26717 231 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 GTF2F1P35269 517 aaKnown RBP eCLIP8.7□□□□□ -1.02
LRRC28-219ENST00000560483 TNFSF9P41273 254 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 ACOT2P49753 483 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 WDR4P57081 412 aaKnown RBP8.7□□□□□ -1.02
LRRC28-219ENST00000560483 MRPS5P82675 430 aaKnown RBP8.7□□□□□ -1.02
LRRC28-219ENST00000560483 TFF2Q03403 129 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 MCL1Q07820 350 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 HSP90AA2PQ14568 343 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms