RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 PIK3CAP42336 1068 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 RWDD2BP57060 319 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 DR1Q01658 176 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 POU5F1BQ06416 359 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 BIRC3Q13489 604 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 HLTFQ14527 1009 aaKnown RBP eCLIP10.39□□□□□ -0.75
RTF1-206ENST00000560447 LIN9Q5TKA1 542 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 AGBL2Q5U5Z8 902 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 DCAF12L1Q5VU92 463 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 DUPD1Q68J44 220 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 SYDE1Q6ZW31 735 aaPredicted RBP10.39□□□□□ -0.75
RTF1-206ENST00000560447 SLC47A2Q86VL8 602 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 WDR49Q8IV35 697 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 TSEN2Q8NCE0 465 aaKnown RBP10.39□□□□□ -0.75
RTF1-206ENST00000560447 ASAP3Q8TDY4 903 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 SLCO2A1Q92959 643 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 KAT5Q92993 513 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 ERP44Q9BS26 406 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 MSTO1Q9BUK6 570 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 NUP85Q9BW27 656 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 MRPL4Q9BYD3 311 aaKnown RBP10.39□□□□□ -0.75
RTF1-206ENST00000560447 IMPG2Q9BZV3 1241 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 DDX47Q9H0S4 455 aaKnown RBP10.39□□□□□ -0.75
RTF1-206ENST00000560447 FAM124BQ9H5Z6 455 aaPredicted RBP10.39□□□□□ -0.75
RTF1-206ENST00000560447 MRPL47Q9HD33 250 aaKnown RBP10.39□□□□□ -0.75
RTF1-206ENST00000560447 HOMER3Q9NSC5 361 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 RBAKQ9NYW8 714 aaPredicted RBP10.39□□□□□ -0.75
RTF1-206ENST00000560447 SCINQ9Y6U3 715 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 SCN4AP35499 1836 aa10.39□□□□□ -0.75
RTF1-206ENST00000560447 DNAJC25-GNG10A0A024R161 153 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 LRRIQ4A6NIV6 560 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 ASB14A6NK59 587 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 ZEB2O60315 1214 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 TOM1L1O75674 476 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 CLTAP09496 248 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 DLATP10515 647 aaKnown RBP10.38□□□□□ -0.75
RTF1-206ENST00000560447 TNNI1P19237 187 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 COMTP21964 271 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 YWHAEP62258 255 aaKnown RBP10.38□□□□□ -0.75
RTF1-206ENST00000560447 CNTN2Q02246 1040 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 CUL2Q13617 745 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 CAPSQ13938 189 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 TFDP1Q14186 410 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 ZSCAN26Q16670 478 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 KYAT1Q16773 422 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 TREML2Q5T2D2 321 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 PRAMEF18Q5VWM3 479 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 CRELD2Q6UXH1 353 aaPredicted RBP10.38□□□□□ -0.75
RTF1-206ENST00000560447 KDM7AQ6ZMT4 941 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 GADL1Q6ZQY3 521 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 SEPT14Q6ZU15 432 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 PAXIP1Q6ZW49 1069 aaPredicted RBP10.38□□□□□ -0.75
RTF1-206ENST00000560447 USP50Q70EL3 339 aaPredicted RBP10.38□□□□□ -0.75
RTF1-206ENST00000560447 NCAPG2Q86XI2 1143 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 PHF13Q86YI8 300 aaPredicted RBP10.38□□□□□ -0.75
RTF1-206ENST00000560447 MCOLN2Q8IZK6 566 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 ATP8B4Q8TF62 1192 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 ZNF516Q92618 1163 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 PCYT2Q99447 389 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 AP1M1Q9BXS5 423 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 NFKBIZQ9BYH8 718 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 ZNF518BQ9C0D4 1074 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 CCDC113Q9H0I3 377 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 TSPYL1Q9H0U9 437 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 GOLPH3Q9H4A6 298 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 CNOT8Q9UFF9 292 aaKnown RBP10.38□□□□□ -0.75
RTF1-206ENST00000560447 FEZ2Q9UHY8 353 aaPredicted RBP10.38□□□□□ -0.75
RTF1-206ENST00000560447 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.38□□□□□ -0.75
RTF1-206ENST00000560447 ANK1P16157 1881 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 PLXNA1Q9UIW2 1896 aa10.38□□□□□ -0.75
RTF1-206ENST00000560447 CNTNAP2Q9UHC6 1331 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 FSCN2O14926 492 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 OGTO15294 1046 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 CLDN3O15551 220 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 PSTPIP1O43586 416 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 SPOPO43791 374 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 HBP1O60381 514 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 PHACTR2O75167 634 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 PPFIA2O75334 1257 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 PPFIA4O75335 1185 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 CNMDO75829 334 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 LSM8O95777 96 aaKnown RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 FAM153BP0C7A2 387 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 KRT5P13647 590 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 ACO1P21399 889 aaKnown RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 TCF7P36402 384 aaPredicted RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 NSFP46459 744 aaKnown RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 NLRP11P59045 1033 aaKnown RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 TAP1Q03518 808 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 KCTD2Q14681 263 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 MESDQ14696 234 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 FAM153CQ494X1 144 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 CELF3Q5SZQ8 465 aaKnown RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 TDRD10Q5VZ19 366 aaKnown RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 SLC13A5Q86YT5 568 aaPredicted RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 UBR7Q8N806 425 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 NLGN2Q8NFZ4 835 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 ALG3Q92685 438 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 TATDN2Q93075 761 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms