RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 I3L4J1 428 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 STK25O00506 426 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 LRG1P02750 347 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 CLTAP09496 248 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 PDCP20941 246 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 LONP1P36776 959 aaKnown RBP13.39□□□□□ -0.27
SPG11-219ENST00000559822 NCKAP1LP55160 1127 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 MCL1Q07820 350 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 PABPC1LQ4VXU2 614 aaKnown RBP13.39□□□□□ -0.27
SPG11-219ENST00000559822 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
SPG11-219ENST00000559822 SLC8B1Q6J4K2 584 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 CD300LGQ6UXG3 332 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 APPL2Q8NEU8 664 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 ZNF461Q8TAF7 563 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 ZMAT2Q96NC0 199 aaKnown RBP13.39□□□□□ -0.27
SPG11-219ENST00000559822 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 NUMBLQ9Y6R0 609 aa13.39□□□□□ -0.27
SPG11-219ENST00000559822 PROB1E7EW31 1015 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 PRRG1O14668 218 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 HNRNPDLO14979 420 aaKnown RBP13.38□□□□□ -0.27
SPG11-219ENST00000559822 XPOTO43592 962 aaKnown RBP13.38□□□□□ -0.27
SPG11-219ENST00000559822 GFRA3O60609 400 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 FAM13AO94988 1023 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
SPG11-219ENST00000559822 NPR3P17342 541 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
SPG11-219ENST00000559822 MCM4P33991 863 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 LIG4P49917 911 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 ROR1Q01973 937 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 PPP2R3AQ06190 1150 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 SLC10A6Q3KNW5 377 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 TPGS2Q68CL5 300 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 ZNF280DQ6N043 979 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 PHLDB3Q6NSJ2 640 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 HAUS6Q7Z4H7 955 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 GPBP1Q86WP2 473 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 CCDC105Q8IYK2 499 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 GPR152Q8TDT2 470 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 FGF13Q92913 245 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 SHDQ96IW2 340 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 ZBTB45Q96K62 511 aaPredicted RBP13.38□□□□□ -0.27
SPG11-219ENST00000559822 TSPAN18Q96SJ8 248 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 REEP2Q9BRK0 252 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 PARVGQ9HBI0 331 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 ARHGEF3Q9NR81 526 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 CA14Q9ULX7 337 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 MAFFQ9ULX9 164 aa13.38□□□□□ -0.27
SPG11-219ENST00000559822 ARHGEF37A1IGU5 675 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 KRBA1A5PL33 1030 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 K7ENM7 598 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 TBCAO75347 108 aaKnown RBP13.37□□□□□ -0.27
SPG11-219ENST00000559822 ABLIM3O94929 683 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 CYP3A5P20815 502 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 IGFBP6P24592 240 aaPredicted RBP13.37□□□□□ -0.27
SPG11-219ENST00000559822 NBL1P41271 181 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 NTHL1P78549 312 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 CTXN3Q4LDR2 81 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 ARSHQ5FYA8 562 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 RSPO2Q6UXX9 243 aaPredicted RBP13.37□□□□□ -0.27
SPG11-219ENST00000559822 ELMOD1Q8N336 334 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 MYCT1Q8N699 235 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 DTWD2Q8NBA8 298 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 C18orf25Q96B23 403 aaPredicted RBP13.37□□□□□ -0.27
SPG11-219ENST00000559822 SUSD3Q96L08 255 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
SPG11-219ENST00000559822 TBC1D17Q9HA65 648 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 AVENQ9NQS1 362 aaPredicted RBP13.37□□□□□ -0.27
SPG11-219ENST00000559822 GDE1Q9NZC3 331 aa13.37□□□□□ -0.27
SPG11-219ENST00000559822 UBQLN1Q9UMX0 589 aaKnown RBP13.37□□□□□ -0.27
SPG11-219ENST00000559822 MRPS23Q9Y3D9 190 aaKnown RBP13.37□□□□□ -0.27
SPG11-219ENST00000559822 PDCD11Q14690 1871 aaKnown RBP13.36□□□□□ -0.27
SPG11-219ENST00000559822 NPHP3-ACAD11A0A0J9YXS1 232 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 WDR27A2RRH5 827 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 VPS37CA5D8V6 355 aaPredicted RBP13.36□□□□□ -0.27
SPG11-219ENST00000559822 TRAK2O60296 914 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 CXCL8P10145 99 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 ATF2P15336 505 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 PTPN2P17706 415 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 PLCG1P19174 1290 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 LRPAP1P30533 357 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 ZNF131P52739 623 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 ARPP19P56211 112 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 PFKPQ01813 784 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 CACNB1Q02641 598 aaPredicted RBP13.36□□□□□ -0.27
SPG11-219ENST00000559822 DHX8Q14562 1220 aaKnown RBP13.36□□□□□ -0.27
SPG11-219ENST00000559822 SF3A1Q15459 793 aaKnown RBP13.36□□□□□ -0.27
SPG11-219ENST00000559822 PARM1Q6UWI2 310 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 TCEAL8Q8IYN2 117 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 LARP4BQ92615 738 aaKnown RBP13.36□□□□□ -0.27
SPG11-219ENST00000559822 RAD54LQ92698 747 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 FGF14Q92915 247 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 CYP4F11Q9HBI6 524 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 DNMT3BQ9UBC3 853 aaKnown RBP13.36□□□□□ -0.27
SPG11-219ENST00000559822 FBXL5Q9UKA1 691 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 TBX20Q9UMR3 447 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 PCDHB8Q9UN66 801 aa13.36□□□□□ -0.27
SPG11-219ENST00000559822 TTC26A0AVF1 554 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 ZNF197O14709 1029 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 OGTO15294 1046 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms