RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 BACH2Q9BYV9 841 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 INO80BQ9C086 356 aaPredicted RBP6.47□□□□□ -1.37
USP3-215ENST00000559771 GBP3Q9H0R5 595 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 RSAD1Q9HA92 442 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 DZANK1Q9NVP4 752 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 USTQ9Y2C2 406 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 HES2Q9Y543 173 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 CYP46A1Q9Y6A2 500 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 FRYLO94915 3013 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 STK36Q9NRP7 1315 aa6.47□□□□□ -1.37
USP3-215ENST00000559771 DOCK8Q8NF50 2099 aa6.46□□□□□ -1.37
USP3-215ENST00000559771 COL4A3Q01955 1670 aa6.46□□□□□ -1.37
USP3-215ENST00000559771 A0A087WWV3 80 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 ARL5CA6NH57 179 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 TBX3O15119 743 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 TEX28O15482 410 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 NARSO43776 548 aaKnown RBP6.46□□□□□ -1.38
USP3-215ENST00000559771 CCNT1O60563 726 aaKnown RBP6.46□□□□□ -1.38
USP3-215ENST00000559771 PFKFB2O60825 505 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 LARGE1O95461 756 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 SOD2P04179 222 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 MSX1P28360 303 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 CA8P35219 290 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 ARL2P36404 184 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 RFC5P40937 340 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 NBL1P41271 181 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 PTENP60484 403 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 CYP4A11Q02928 519 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 MBTD1Q05BQ5 628 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 DNAH14Q0VDD8 3507 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 ST3GAL1Q11201 340 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 EMC2Q15006 297 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 ATAT1Q5SQI0 421 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 TDRD5Q8NAT2 981 aaKnown RBP6.46□□□□□ -1.38
USP3-215ENST00000559771 RNF149Q8NC42 400 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 PSPC1Q8WXF1 523 aaKnown RBP6.46□□□□□ -1.38
USP3-215ENST00000559771 SLC7A3Q8WY07 619 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 ZNF707Q96C28 371 aaPredicted RBP6.46□□□□□ -1.38
USP3-215ENST00000559771 PGBD4Q96DM1 585 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 CPB2Q96IY4 423 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 B3GALT6Q96L58 329 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 NACC1Q96RE7 527 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 RPS6KC1Q96S38 1066 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 GAD1Q99259 594 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 TMEM175Q9BSA9 504 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 HERC2P3Q9BVR0 1158 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 CXCL16Q9H2A7 254 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 SFXN1Q9H9B4 322 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 RXFP1Q9HBX9 757 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 CHST7Q9NS84 486 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 PDRG1Q9NUG6 133 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 PCMTD2Q9NV79 361 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 CACNG4Q9UBN1 327 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 DBR1Q9UK59 544 aaKnown RBP6.46□□□□□ -1.38
USP3-215ENST00000559771 PPME1Q9Y570 386 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 IPPQ9Y573 584 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 CACNA1HO95180 2353 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 CNTNAP2Q9UHC6 1331 aa6.46□□□□□ -1.38
USP3-215ENST00000559771 DOCK6Q96HP0 2047 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 DMXL1Q9Y485 3027 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 VWA8A3KMH1 1905 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 CCDC194A0A1B0GVG4 234 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 PRR23AA6NEV1 266 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 CPLX1O14810 134 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 B4GALT5O43286 388 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 RFPL2O75678 378 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 LYPLA2O95372 231 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 ALDH2P05091 517 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 EDN1P05305 212 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 MYBP10242 640 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 GCFC2P16383 781 aaKnown RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 ARF4P18085 180 aaPredicted RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 GLRA2P23416 452 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 IGFBP6P24592 240 aaPredicted RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 KLRC2P26717 231 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 MLH1P40692 756 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 SCNN1GP51170 649 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 CLCN5P51795 746 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 DSG1Q02413 1049 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 RNASELQ05823 741 aaKnown RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 POU5F1BQ06416 359 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 CAPSQ13938 189 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 ME3Q16798 604 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 XKR9Q5GH70 373 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 NCAPH2Q6IBW4 605 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 LILRA6Q6PI73 481 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 C15orf39Q6ZRI6 1047 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 CABP7Q86V35 215 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 PPFIBP1Q86W92 1011 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 CDR2LQ86X02 465 aaPredicted RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 CMASQ8NFW8 434 aaPredicted RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 RSAD2Q8WXG1 361 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 ATOH1Q92858 354 aaPredicted RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 TP53INP1Q96A56 240 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 MTMR9Q96QG7 549 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 MYADMQ96S97 322 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 EIF2AK1Q9BQI3 630 aaKnown RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 JPH2Q9BR39 696 aaPredicted RBP6.45□□□□□ -1.38
USP3-215ENST00000559771 PAAF1Q9BRP4 392 aa6.45□□□□□ -1.38
USP3-215ENST00000559771 RHOBTB2Q9BYZ6 727 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms