RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CCDC195A0A1B0GUA6 201 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 TTC26A0AVF1 554 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 TISP43B9A030 160 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 ANKRD63C9JTQ0 380 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 FAM189A1O60320 539 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 FGFR3P22607 806 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 TKTP29401 623 aaKnown RBP13.71□□□□□ -0.21
LRRC28-214ENST00000559433 RPL9P32969 192 aaKnown RBP13.71□□□□□ -0.21
LRRC28-214ENST00000559433 BRCC3P46736 316 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 SPAG1Q07617 926 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 ENOX2Q16206 610 aaKnown RBP13.71□□□□□ -0.21
LRRC28-214ENST00000559433 GPR149Q86SP6 731 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 CMASQ8NFW8 434 aaPredicted RBP13.71□□□□□ -0.21
LRRC28-214ENST00000559433 LNX1Q8TBB1 728 aaPredicted RBP13.71□□□□□ -0.21
LRRC28-214ENST00000559433 FEZF2Q8TBJ5 459 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 STAMQ92783 540 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 KIF12Q96FN5 646 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 MFSD14AQ96MC6 490 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 TNMDQ9H2S6 317 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 CUEDC2Q9H467 287 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 PLEKHA4Q9H4M7 779 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 RPF1Q9H9Y2 349 aaKnown RBP13.71□□□□□ -0.21
LRRC28-214ENST00000559433 PIDD1Q9HB75 910 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 PANK4Q9NVE7 773 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 EXOC7Q9UPT5 735 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 NUB1Q9Y5A7 615 aa13.71□□□□□ -0.21
LRRC28-214ENST00000559433 FRMD3A2A2Y4 597 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 LACTBL1A8MY62 500 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 PPP1R37O75864 691 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 GCNT3O95395 438 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 C1RP00736 705 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 ZXDAP98168 799 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 E2F4Q16254 413 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 AXDND1Q5T1B0 1012 aaPredicted RBP13.7□□□□□ -0.22
LRRC28-214ENST00000559433 L1TD1Q5T7N2 865 aaKnown RBP13.7□□□□□ -0.22
LRRC28-214ENST00000559433 ADALQ6DHV7 355 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 SLFN12LQ6IEE8 588 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 CYP26C1Q6V0L0 522 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 C15orf39Q6ZRI6 1047 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 CCDC149Q6ZUS6 474 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 OTOP3Q7RTS5 596 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 CCDC65Q8IXS2 484 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 IQUBQ8NA54 791 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 TDRD5Q8NAT2 981 aaKnown RBP13.7□□□□□ -0.22
LRRC28-214ENST00000559433 KREMEN2Q8NCW0 462 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 HDAC7Q8WUI4 952 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 ACCSQ96QU6 501 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 CLSTN3Q9BQT9 956 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 IKZF4Q9H2S9 585 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 C11orf16Q9NQ32 467 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 FAM13BQ9NYF5 915 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
LRRC28-214ENST00000559433 C2CD4DB7Z1M9 353 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 ADAM12O43184 909 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 XPOTO43592 962 aaKnown RBP13.69□□□□□ -0.22
LRRC28-214ENST00000559433 RFPL2O75678 378 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 MCM4P33991 863 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 ACOT2P49753 483 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 CASP5P51878 434 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 AMPD3Q01432 767 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 KCNA1Q09470 495 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 ALCAMQ13740 583 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 LIN9Q5TKA1 542 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 LILRA6Q6PI73 481 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 ANKS3Q6ZW76 656 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 POMGNT1Q8WZA1 660 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 SMG7Q92540 1137 aaKnown RBP13.69□□□□□ -0.22
LRRC28-214ENST00000559433 PBXIP1Q96AQ6 731 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 STRA6Q9BX79 667 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 KBTBD4Q9NVX7 518 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 ZDHHC7Q9NXF8 308 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 MTRRQ9UBK8 725 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 LIMD1Q9UGP4 676 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 FBXW11Q9UKB1 542 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 CPSF3Q9UKF6 684 aaKnown RBP13.69□□□□□ -0.22
LRRC28-214ENST00000559433 AGO2Q9UKV8 859 aaKnown RBP13.69□□□□□ -0.22
LRRC28-214ENST00000559433 UBQLN1Q9UMX0 589 aaKnown RBP13.69□□□□□ -0.22
LRRC28-214ENST00000559433 PCDHB13Q9Y5F0 798 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.69□□□□□ -0.22
LRRC28-214ENST00000559433 STYXL1Q9Y6J8 313 aa13.69□□□□□ -0.22
LRRC28-214ENST00000559433 TMEM221A6NGB7 291 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 M0R296 226 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 TULP1O00294 542 aaPredicted RBP13.68□□□□□ -0.22
LRRC28-214ENST00000559433 POLR2DO15514 142 aaKnown RBP13.68□□□□□ -0.22
LRRC28-214ENST00000559433 OR1D2P34982 312 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 ASIC1P78348 528 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 PTPN21Q16825 1174 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
LRRC28-214ENST00000559433 RESP18Q5W5W9 173 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 JADE1Q6IE81 842 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 TRIM67Q6ZTA4 783 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 CD302Q8IX05 232 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 SYCP3Q8IZU3 236 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 TMEM130Q8N3G9 435 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 TSPAN18Q96SJ8 248 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 FGFBP2Q9BYJ0 223 aa13.68□□□□□ -0.22
LRRC28-214ENST00000559433 MAGEF1Q9HAY2 307 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms