RNA–Protein interactions for RNA: ENST00000559074.5

SEMA4B-208, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 1,697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-208ENST00000559074 MAGEA1P43355 309 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 TRPC3Q13507 836 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 CUL2Q13617 745 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 CCDC122Q5T0U0 273 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 UBXN11Q5T124 520 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 NT5DC4Q86YG4 428 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 ZNF592Q92610 1267 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 SNX27Q96L92 541 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 ARID3AQ99856 593 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 TRIM6Q9C030 488 aaPredicted RBP16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 LACRTQ9GZZ8 138 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 UNC93B1Q9H1C4 597 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 NXF3Q9H4D5 531 aaKnown RBP16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 TRMT13Q9NUP7 481 aaKnown RBP16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 SNTG2Q9NY99 539 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 TRIM10Q9UDY6 481 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 PHF24Q9UPV7 400 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 C2CD2Q9Y426 696 aa16.8■□□□□ 0.28
SEMA4B-208ENST00000559074 A0A0U1RQG5 324 aaPredicted RBP16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 DDX3XO00571 662 aaKnown RBP eCLIP16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 PJA2O43164 708 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 RPS6KA5O75582 802 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 THPOP40225 353 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 YARSP54577 528 aaKnown RBP16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 MYL6P60660 151 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 GNG11P61952 73 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 KIF5AQ12840 1032 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 TMEM132DQ14C87 1099 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 SGSM1Q2NKQ1 1148 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 C10orf76Q5T2E6 689 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 SCARA3Q6AZY7 606 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 C1orf127Q8N9H9 656 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 SLC43A3Q8NBI5 491 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 KIF18AQ8NI77 898 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 LNX1Q8TBB1 728 aaPredicted RBP16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 DHX38Q92620 1227 aaKnown RBP16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 IRX2Q9BZI1 471 aaPredicted RBP16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 PLEKHA5Q9HAU0 1116 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 STARD7Q9NQZ5 370 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 MYO1AQ9UBC5 1043 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 DNAI1Q9UI46 699 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 GUCA1BQ9UMX6 200 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 NOD1Q9Y239 953 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 NUB1Q9Y5A7 615 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 ATP8B3O60423 1300 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 UMODL1Q5DID0 1318 aa16.79■□□□□ 0.28
SEMA4B-208ENST00000559074 KBTBD13C9JR72 458 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 CLSTN1O94985 981 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 TRIM71Q2Q1W2 868 aaKnown RBP16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 SLC30A5Q8TAD4 765 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 EPS8L1Q8TE68 723 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 TAF4BQ92750 862 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 PAK6Q9NQU5 681 aaPredicted RBP16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 SIX4Q9UIU6 781 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 NAGPAQ9UK23 515 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 DERAQ9Y315 318 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 HTTP42858 3142 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 FANCGO15287 622 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 CYP26A1O43174 497 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 RECQL4O94761 1208 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 NAB2Q15742 525 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 ZNF699Q32M78 642 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 CXorf38Q8TB03 319 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 WDR24Q96S15 920 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 AGPAT1Q99943 283 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 NIF3L1Q9GZT8 377 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 XYLT2Q9H1B5 865 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 NOCTQ9UK39 431 aaKnown RBP16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 HES2Q9Y543 173 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 PAXBP1Q9Y5B6 917 aa16.78■□□□□ 0.28
SEMA4B-208ENST00000559074 CAND2O75155 1236 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 SGPL1O95470 568 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 ITGB3P05106 788 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 KRT5P13647 590 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 ACO1P21399 889 aaKnown RBP16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 PDE6CP51160 858 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 FAM26DQ5JW98 314 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 TWF2Q6IBS0 349 aaKnown RBP16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 ALKBH5Q6P6C2 394 aaKnown RBP16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 NOP9Q86U38 636 aaKnown RBP16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 UBR7Q8N806 425 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 SLC20A1Q8WUM9 679 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 KIF12Q96FN5 646 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 CHST12Q9NRB3 414 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 CNTN3Q9P232 1028 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 ITGA11Q9UKX5 1188 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 ST3GAL5Q9UNP4 418 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 IPPQ9Y573 584 aa16.77■□□□□ 0.28
SEMA4B-208ENST00000559074 DNM1LO00429 736 aa16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 KRT19P08727 400 aa16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 CYP11B1P15538 503 aa16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 TNFAIP3P21580 790 aa16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 ZNF569Q5MCW4 686 aa16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 FBXO47Q5MNV8 452 aa16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 ALKAL1Q6UXT8 129 aa16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 SLC47A2Q86VL8 602 aa16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 SMG8Q8ND04 991 aaKnown RBP16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 U2AF1L4Q8WU68 220 aaKnown RBP16.76■□□□□ 0.27
SEMA4B-208ENST00000559074 CNTN6Q9UQ52 1028 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms