RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 TPM3P06753 285 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 ATP1A3P13637 1013 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 LAG3P18627 525 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 POLR2BP30876 1174 aaKnown RBP7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 PIK3CAP42336 1068 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 OR1G1P47890 313 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 FMO5P49326 533 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 GUCY2FP51841 1108 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 RABGGTBP53611 331 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 COPB1P53618 953 aaKnown RBP7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 CLDN10P78369 228 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 RBP5P82980 135 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 PLCB2Q00722 1185 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 PPP3CAQ08209 521 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 KCNH2Q12809 1159 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 RAB30Q15771 203 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 FILIP1LQ4L180 1135 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 VWA3BQ502W6 1294 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 FKBP15Q5T1M5 1219 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 TDRD10Q5VZ19 366 aaKnown RBP7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 KRT39Q6A163 491 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 SV2AQ7L0J3 742 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 TRAPPC11Q7Z392 1133 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 C1orf127Q8N9H9 656 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 CCDC150Q8NCX0 1101 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 GSTCDQ8NEC7 633 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 OR5B17Q8NGF7 314 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 ZNF689Q96CS4 500 aaPredicted RBP7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 DDX27Q96GQ7 796 aaKnown RBP7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 FAM84AQ96KN4 292 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 ZNF560Q96MR9 790 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 TMEM175Q9BSA9 504 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 IMPG2Q9BZV3 1241 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 VPS16Q9H269 839 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 HSD3B7Q9H2F3 369 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 NDST4Q9H3R1 872 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 GOLGA2P5Q9HBQ8 144 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 AAASQ9NRG9 546 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 LIMA1Q9UHB6 759 aaKnown RBP7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 MSRAQ9UJ68 235 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 PRG3Q9Y2Y8 225 aaPredicted RBP7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 PCDHA11Q9Y5I1 949 aa7.12□□□□□ -1.27
CHRNA3-204ENST00000559002 LGALS16A8MUM7 142 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 GRXCR1A8MXD5 290 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 P4HA2O15460 535 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 CBFA2T2O43439 604 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 DDHD2O94830 711 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 HLA-DRAP01903 254 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 C4BPAP04003 597 aaKnown RBP7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 ALDH2P05091 517 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 LRPAP1P30533 357 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 RPL9P32969 192 aaKnown RBP7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 PPM1AP35813 382 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 PNPLA4P41247 253 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 SLC11A1P49279 550 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 ALDH7A1P49419 539 aaKnown RBP7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 CLCNKBP51801 687 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 BCAR1P56945 870 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 FANCCQ00597 558 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 SOX4Q06945 474 aaPredicted RBP7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 DSC1Q08554 894 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 MYO1EQ12965 1108 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 NCOA4Q13772 614 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 NAB2Q15742 525 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 ZBTB6Q15916 424 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 ZNF699Q32M78 642 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 ZACNQ401N2 412 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 CBWD6Q4V339 395 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 WDR44Q5JSH3 913 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 CBWD3Q5JTY5 395 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 CBWD5Q5RIA9 395 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 C1orf220Q5T0J3 134 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 PRPF38BQ5VTL8 546 aaKnown RBP7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 C9orf57Q5W0N0 161 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 FAM109BQ6ICB4 259 aaPredicted RBP7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 GBP6Q6ZN66 633 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 ZNF280BQ86YH2 543 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 COLGALT2Q8IYK4 626 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 FBXL13Q8NEE6 735 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 SP7Q8TDD2 431 aaPredicted RBP7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 TAS1R2Q8TE23 839 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 ZNF516Q92618 1163 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 ZNF558Q96NG5 402 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 COLEC11Q9BWP8 271 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 NRDE2Q9H7Z3 1164 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 GCNT4Q9P109 453 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 HCSTQ9UBK5 93 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 DNAJB4Q9UDY4 337 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 AGAP1Q9UPQ3 857 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 FAN1Q9Y2M0 1017 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 RWDD3Q9Y3V2 267 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 NUB1Q9Y5A7 615 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 PCDHB12Q9Y5F1 795 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 MRPL42Q9Y6G3 142 aaKnown RBP7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 RALGAPA2Q2PPJ7 1873 aa7.11□□□□□ -1.27
CHRNA3-204ENST00000559002 CHD9Q3L8U1 2897 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 A0A1W2PPC1 479 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 ANO9A1A5B4 782 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 LCHNA4D1U4 455 aa7.1□□□□□ -1.27
CHRNA3-204ENST00000559002 LINC01553A4QN01 128 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms