RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 KCNQ1P51787 676 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 MRPS5P82675 430 aaKnown RBP8.35□□□□□ -1.07
SPG11-213ENST00000558988 ZXDAP98168 799 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 RBL2Q08999 1139 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 APOBRQ0VD83 1088 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 PPFIA1Q13136 1202 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 VMACQ2NL98 169 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 JAKMIP3Q5VZ66 844 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 XRRA1Q6P2D8 792 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 RUFY4Q6ZNE9 571 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 TRMT1LQ7Z2T5 733 aaKnown RBP8.35□□□□□ -1.07
SPG11-213ENST00000558988 CYP2W1Q8TAV3 490 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 SEPT1Q8WYJ6 367 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 SEPT8Q92599 483 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 GPRASP2Q96D09 838 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 CDHR1Q96JP9 859 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 NECAB3Q96P71 396 aaPredicted RBP8.35□□□□□ -1.07
SPG11-213ENST00000558988 ASB2Q96Q27 587 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 BDH2Q9BUT1 245 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 ANO3Q9BYT9 981 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 OSBPL7Q9BZF2 842 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 RBM28Q9NW13 759 aaKnown RBP8.35□□□□□ -1.07
SPG11-213ENST00000558988 TPX2Q9ULW0 747 aaKnown RBP8.35□□□□□ -1.07
SPG11-213ENST00000558988 MTCH2Q9Y6C9 303 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 KAT6AQ92794 2004 aa8.35□□□□□ -1.07
SPG11-213ENST00000558988 TCF20Q9UGU0 1960 aaKnown RBP8.35□□□□□ -1.07
SPG11-213ENST00000558988 COL4A4P53420 1690 aaPredicted RBP8.34□□□□□ -1.07
SPG11-213ENST00000558988 GSTTP1A0A1W2PQM5 241 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 SMCO2A6NFE2 343 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 STXBP3O00186 592 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 EFCAB14O75071 495 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 ATG7O95352 703 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 GJB5O95377 273 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 ESR1P03372 595 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 ARP10275 920 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 GHRP10912 638 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 KCNA2P16389 499 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 METAP2P50579 478 aaKnown RBP eCLIP8.34□□□□□ -1.07
SPG11-213ENST00000558988 TMEM62Q0P6H9 643 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 KRT32Q14532 448 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 BLOC1S2Q6QNY1 142 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 EP400NLQ6ZTU2 488 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 Q6ZUG5 572 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 ARMCX6Q7L4S7 300 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 SGMS1Q86VZ5 419 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 GIMAP8Q8ND71 665 aaPredicted RBP8.34□□□□□ -1.07
SPG11-213ENST00000558988 STK35Q8TDR2 534 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 TRAPPC12Q8WVT3 735 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 DNAJB3Q8WWF6 145 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 ATXN2LQ8WWM7 1075 aaKnown RBP8.34□□□□□ -1.07
SPG11-213ENST00000558988 BRF1Q92994 677 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 YME1L1Q96TA2 773 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 RAD9AQ99638 391 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 SENP7Q9BQF6 1050 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 SDF4Q9BRK5 362 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 C17orf80Q9BSJ5 609 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 IFIH1Q9BYX4 1025 aaKnown RBP8.34□□□□□ -1.07
SPG11-213ENST00000558988 AZI2Q9H6S1 392 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 JADE2Q9NQC1 790 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 ERAP1Q9NZ08 941 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 TUBE1Q9UJT0 475 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 UBIAD1Q9Y5Z9 338 aa8.34□□□□□ -1.07
SPG11-213ENST00000558988 LINC01553A4QN01 128 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 EXOSC10Q01780 885 aaKnown RBP8.33□□□□□ -1.08
SPG11-213ENST00000558988 AKAP17AQ02040 695 aaKnown RBP8.33□□□□□ -1.08
SPG11-213ENST00000558988 PLEKHG4Q58EX7 1191 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 MICAL3Q7RTP6 2002 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 RSPH3Q86UC2 560 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 PHKBQ93100 1093 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 TGS1Q96RS0 853 aaKnown RBP8.33□□□□□ -1.08
SPG11-213ENST00000558988 UHRF1Q96T88 793 aaPredicted RBP8.33□□□□□ -1.08
SPG11-213ENST00000558988 ARID3AQ99856 593 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 MXRA8Q9BRK3 442 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 SMARCAD1Q9H4L7 1026 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 RIC8AQ9NPQ8 531 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 KCNH7Q9NS40 1196 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 SLC9A2Q9UBY0 812 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 TCEAL9Q9UHQ7 104 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 GINS2Q9Y248 185 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 INSL6Q9Y581 213 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 COL6A3P12111 3177 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 CUL9Q8IWT3 2517 aa8.33□□□□□ -1.08
SPG11-213ENST00000558988 NRCAMQ92823 1304 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 M0QZ92 97 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 CHRNA1P02708 482 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 NEFLP07196 543 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 HMGB1P09429 215 aaKnown RBP8.32□□□□□ -1.08
SPG11-213ENST00000558988 HOXC8P31273 242 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 ACTR2P61160 394 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 CCT2P78371 535 aaKnown RBP8.32□□□□□ -1.08
SPG11-213ENST00000558988 TIGD5Q53EQ6 642 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 CEP55Q53EZ4 464 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 TAF2Q6P1X5 1199 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 PLA2G4DQ86XP0 818 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 CKAP2LQ8IYA6 745 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 RASGRP4Q8TDF6 673 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 INTS4Q96HW7 963 aaKnown RBP8.32□□□□□ -1.08
SPG11-213ENST00000558988 NCOA5Q9HCD5 579 aaKnown RBP8.32□□□□□ -1.08
SPG11-213ENST00000558988 BARHL2Q9NY43 387 aa8.32□□□□□ -1.08
SPG11-213ENST00000558988 SNX14Q9Y5W7 946 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms